SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene5317

Length: 935 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene5317

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18821	17/25
SustainPine v2.0	sp_v2.0_unigene33134	8/25

Source	Descriptions	Term	Type	Identity
AutoFact	Putative integral membrane protein n=4 Tax=Malvoideae RepID=B2ZAP4_9ROSI	-	-	69%
FL-Next	sp=GDP-mannose transporter GONST3; Arabidopsis thaliana (Mouse-ear cress).	-	-	70%
Blast2go	integral membrane protein	-	-	84%

Source	GOs	Term	Type	e value	Identity
Blast2go	nucleotide-sugar transport	GO:0015780	Biological Process	0.0	84%

Source	InterPros	Term	Type	e value	Identity
Sma3	UAA transporter	IPR013657	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 69)

Position	A %	C %	G %	T %	Probability
41		50		50	1.0
46		50		50	1.0
47	50		50		1.0
49		50	50		1.0
50		50	50		1.0
53	50		50		1.0
54			50	50	1.0
55	50	50			1.0
57		50	50		1.0
63	50			50	1.0
161		27	72		1.0
162	18	72	9		0.999994
179		10		90	0.90298
180	10		90		0.90298
181		10	90		0.90298
183		10	90		0.90298
184	10		90		0.90298
235		90	10		0.90298
238		90		10	0.90298
239		90	10		0.90298
242	90	10			0.90298
243	90			10	0.90298
244	90			10	0.90298
245			10	90	0.90298
247	90	10			0.90298
252		10	90		0.90298
254	90	10			0.90298
255			90	10	0.90298
256	90	10			0.90298
294			10	90	0.90298
296		10		90	0.90298
300	90	10			0.90298
301	90	10			0.90298
304	88			11	0.923564
307		12		87	0.992554
308			87	12	0.992554
312	12	87			0.992554
314	77		11	11	0.968132
315	77	11		11	0.968132
316	11	88			0.923564
317	88		11		0.923564
318			88	11	0.923564
320	11	88			0.923564
324	88			11	0.923564
325	88		11		0.923564
328	87		12		0.992554
329	87			12	0.992554
331	12			87	0.992554
332		12		87	0.992554
335		12		87	0.992554
336	12			87	0.992554
345			11	88	0.923564
347	88	11			0.923564
348	88	11			0.923564
353	88		11		0.923564
354		11	88		0.923564
355	88			11	0.923564
358	90		10		0.90298
361		90	10		0.90298
362	10			90	0.90298
364		10	90		0.90298
365		10		90	0.90298
368			10	90	0.90298
369		90	10		0.90298
370	90	10			0.90298
371			90	10	0.90298
377	90	10			0.90298
552	90	10			0.90298
756	80		20		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain