SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene5220

Length: 796 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene5220

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene6717	13/20
SustainPine v2.0	sp_v2.0_unigene14388	6/20

Source	Descriptions	Term	Type	Identity
AutoFact	Thiosulfate sulfurtransferase n=1 Tax=Datisca glomerata RepID=Q9ZPK0_DATGL	-	-	75%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	84%
Blast2go	thiosulfate sulfurtransferase	-	-	86%

Source	ECs	Term	Type	e value	Identity
Blast2go	Thiosulfate sulfurtransferase.	EC:2.8.1.1	-	0.0	86%
Blast2go	3-mercaptopyruvate sulfurtransferase.	EC:2.8.1.2	-	0.0	86%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Cysteine and methionine metabolism	00270		0.0	86%
Blast2go	Metabolic pathways	01100		0.0	86%

Source	GOs	Term	Type	Identity
Blast2go	aging	GO:0007568	Biological Process	86%
Blast2go	sulfate transport	GO:0008272	Biological Process	86%
Blast2go	thiosulfate sulfurtransferase activity	GO:0004792	Molecular Function	86%
Blast2go	3-mercaptopyruvate sulfurtransferase activity	GO:0016784	Molecular Function	86%
Blast2go	mitochondrion	GO:0005739	Cellular Component	86%
Blast2go	chloroplast	GO:0009507	Cellular Component	86%

Source	InterPros	Term	Type	e value	Identity
Sma3	Rhodanese-like	IPR001763	-	0.0	-
Sma3	Thiosulphate sulfurtransferase, conserved site	IPR001307	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 79)

Position	A %	C %	G %	T %	Probability
143	66	33			0.997452
146		33	66		0.997452
148		66		33	0.997452
149	66		33		0.997452
154			66	33	0.997452
156			33	66	0.997452
160		66	33		0.997452
161		66		33	0.997452
252	60		40		1.0
254		40		60	1.0
262		40	60		1.0
264			60	40	1.0
266	60		40		1.0
267	60	40			1.0
268	60			40	1.0
276	80	20			0.995493
277	20		80		0.995493
305		83		16	0.994512
306	83	16			0.994512
307	83		16		0.994512
308	83			16	0.994512
310	16		83		0.994512
311		16		83	0.994512
312	83	16			0.994512
315	83		16		0.994512
317	83	16			0.994512
318	83			16	0.994512
321	16		83		0.994512
322		16	83		0.994512
323		16		83	0.994512
326		14		85	0.993533
331		85	14		0.993533
334	14		85		0.993533
335	85	14			0.993533
336	75	25			1.0
337			85	14	0.993533
339	71		14		0.984337
340	71	14	14		0.984337
341	71	14	14		0.984337
344		14		14	0.984337
346	85			14	0.993533
347		14		85	0.993533
348		71	14	14	0.984337
349		85	14		0.993533
350	14	85			0.993533
352			14	85	0.993533
356	85	14			0.993533
358		14	85		0.993533
363	28		71		1.0
369		28		71	1.0
372		71		28	1.0
411	22	77			0.999999
412			11	88	0.923564
414		11	11	77	0.968132
417	77			22	0.999999
421	77	11		11	0.968132
422		22	77		0.999999
423	88			11	0.923564
424	77	11		11	0.968132
425			88	11	0.923564
426		11	88		0.923564
427	11	66		22	0.999999
429		10		90	0.90298
430			20	80	0.999996
434		90	10		0.90298
437	80		20		0.999996
438	90	10			0.90298
439		10		90	0.90298
441	90			10	0.90298
442			10	90	0.90298
443		90	10		0.90298
445	90			10	0.90298
449		10	90		0.90298
451	10			90	0.90298
526		23		76	1.0
619	71	28			1.0
659		25		75	1.0
677	75		25		1.0
687	25		75		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain