SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene5129

Length: 964 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene5129

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene21202	20/23

Source	Descriptions	Term	Type	Identity
AutoFact	Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SSL4_RICCO	-	-	72%
FL-Next	tr=Putative uncharacterized protein Sb10g007840; Sorghum bicolor (Sorghum) (Sorghum vulgare).	-	-	83%
Blast2go	binding protein	-	-	87%

Source	GOs	Term	Type	e value	Identity
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	87%

Source	InterPros	Term	Type	Identity
Sma3	C2 calcium-dependent membrane targeting	IPR000008	-	-
Sma3	NUDIX hydrolase domain	IPR000086	-	-
Sma3	Armadillo	IPR000225	-	-
Sma3	HEAT	IPR000357	-	-
Sma3	Bacterial extracellular solute-binding protein, family 5	IPR000914	-	-
Sma3	Ribonuclease A	IPR001427	-	-
Sma3	Armadillo-like helical	IPR011989	-	-
Sma3	C2 membrane targeting protein	IPR018029	-	-

Full-Lengther Next Prediction

SNPs (tot: 69)

Position	A %	C %	G %	T %	Probability
43	66	33			0.997452
44		33	33	33	0.997753
46		66		33	0.997452
47	33		66		0.997452
48	66			33	0.997452
49			33	66	0.997452
50	33			66	0.997452
52	66	33			0.997452
53	66			33	0.997452
55		66	33		0.997452
56	66		33		0.997452
57		33	66		0.997452
58			66	33	0.997452
59	66		33		0.997452
60		66		33	0.997452
197	75	25			0.996473
198	75		25		0.996473
200		25	75		0.996473
204		75	25		0.996473
208	75			25	0.996473
209	75			25	0.996473
215	75			25	0.996473
216	75	25			0.996473
220	75	25			0.996473
467	75	25			0.996473
470		25	75		0.996473
476	75	25			0.996473
478	75			25	0.996473
479	75			25	0.996473
483	75	25			0.996473
485		20	20	60	0.99255
486			80	20	0.995493
488	20		80		0.995493
489		20	60	20	0.99255
490			80	20	0.995493
491	80	20			0.995493
492	20			80	0.995493
493	80			20	0.995493
494	83		16		0.994512
499	16		83		0.994512
501			83	16	0.994512
503	85	14			0.993533
504			14	85	0.993533
506		14	85		0.993533
507			14	85	0.993533
510	14			85	0.993533
512		14		85	0.993533
513	85			14	0.993533
515	85		14		0.993533
516			14	85	0.993533
517		14		85	0.993533
521	85	14			0.993533
523	85	14			0.993533
536		25	75		1.0
540		75		25	1.0
543	75	25			1.0
544		75		25	1.0
548	75	25			1.0
549	75			25	1.0
552	75			25	1.0
553		25	75		1.0
554	25		75		1.0
586	90	10			0.90298
587	90		10		0.90298
591	10	90			0.90298
598	90		10		0.90298
599	90			10	0.90298
603	10			90	0.90298
674	50			50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain