SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene5055

Length: 941 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene5055

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene9512	14/21
SustainPine v2.0	sp_v2.0_unigene28570	5/21
SustainPine v2.0	sp_v2.0_unigene51773	1/21

Source	Descriptions	Term	Type	Identity
AutoFact	Protein phosphatase-2c, putative n=1 Tax=Ricinus communis RepID=B9RM68_RICCO	-	-	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	84%
Blast2go	protein phosphatase 2c	-	-	75%

Source	GOs	Term	Type	e value	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	0.0	75%
Blast2go	hydrolase activity	GO:0016787	Molecular Function	0.0	75%

Source	InterPros	Term	Type	Identity
Sma3	Protein phosphatase 2C	IPR015655	-	-
Sma3	Protein phosphatase 2C-like	IPR001932	-	-
Sma3		IPR014045	-	-

Full-Lengther Next Prediction

SNPs (tot: 67)

Position	A %	C %	G %	T %	Probability
77	75	25			0.996473
78	75		25		0.996473
81	75		25		0.996473
82	75			25	0.996473
83	75		25		0.996473
85	75	25			0.996473
88			75	25	0.996473
89		75	25		0.996473
90	75		25		0.996473
91		25	75		0.996473
94			75	25	0.996473
98	75			25	0.996473
99		25	75		0.996473
109	80	20			0.995493
113	80		20		0.995493
114	80			20	0.995493
117	80	20			0.995493
118			80	20	0.995493
121		80	20		0.995493
124		90		10	0.90298
125	80		20		0.999996
126	80			20	0.999996
129		10	90		0.90298
130	80			20	0.999996
132	20	80			0.999996
133	90	10			0.90298
137		90	10		0.90298
138	90		10		0.90298
139		10	90		0.90298
228	90	10			0.90298
232	90		10		0.90298
233			90	10	0.90298
238		10	90		0.90298
242	90			10	0.90298
243			10	90	0.90298
245	90	10			0.90298
247		90	10		0.90298
249		10	90		0.90298
251	90	10			0.90298
253	10		90		0.90298
274	66		33		1.0
358		25		75	0.996473
360	75			25	0.996473
361		25		75	0.996473
363	75			25	0.996473
365	25		75		0.996473
366	75	25			0.996473
367	75	25			0.996473
369	25			25	0.995533
380		25		75	0.996473
382		25	75		0.996473
493		33	66		0.997452
494			33	66	0.997452
496		33		66	0.997452
498			66	33	0.997452
501		33	66		0.997452
504		66		33	0.997452
506		66	33		0.997452
507	66		33		0.997452
508	66	33			0.997452
512		33	66		0.997452
513	33		66		0.997452
541	18			81	0.999994
544	81		18		0.999994
545	81		18		0.999994
549	18		81		0.999994
563		18		81	0.999994

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain