SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene4976

Length: 869 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene4976

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene4468	13/15
SustainPine v2.0	sp_v2.0_unigene68168	2/15

Source	Descriptions	Term	Type	Identity
AutoFact	12-oxophytodienoate reductase 7 n=3 Tax=BEP clade RepID=OPR7_ORYSJ	-	-	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	61%
Blast2go	12-oxophytodienoate reductase 3	-	-	72%

Source	ECs	Term	Type	e value	Identity
Blast2go	12-oxophytodienoate reductase.	EC:1.3.1.42	-	0.0	72%

Source	KEGGs	Term	Identity
Blast2go	alpha-Linolenic acid metabolism	00592	72%
Blast2go	Biosynthesis of plant hormones	01070	72%
Blast2go	Metabolic pathways	01100	72%

Source	GOs	Term	Type	Identity
Blast2go	jasmonic acid biosynthetic process	GO:0009695	Biological Process	72%
Blast2go	response to wounding	GO:0009611	Biological Process	72%
Blast2go	response to ozone	GO:0010193	Biological Process	72%
Blast2go	response to fungus	GO:0009620	Biological Process	72%
Blast2go	12-oxophytodienoate reductase activity	GO:0016629	Molecular Function	72%
Blast2go	peroxisome	GO:0005777	Cellular Component	72%

Source	InterPros	Term	Type	Identity
Sma3	NADH:flavin oxidoreductase/NADH oxidase, N-terminal	IPR001155	-	-
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	-
Sma3	Aldolase-type TIM barrel	IPR013785	-	-

Full-Lengther Next Prediction

SNPs (tot: 67)

Position	A %	C %	G %	T %	Probability
79	50		50		1.0
81	50	50			1.0
82			50	50	1.0
85	40	20	40		1.0
86		80	20		0.995493
89	40		20	40	1.0
91			60	40	1.0
92	20		40	40	1.0
93	40	60			1.0
94		20		80	0.995493
97		80		20	0.995493
99	80		20		0.995493
103	40		20	40	1.0
107	20			80	0.995493
111			20	80	0.995493
162	60			40	1.0
179		60		40	1.0
259		60	40		1.0
271	83	16			0.994512
276		83	16		0.994512
280		16		83	0.994512
281	83	16			0.994512
284			16	83	0.994512
285			16	83	0.994512
286		16	83		0.994512
288		83	16		0.994512
289			83	16	0.994512
291	16	83			0.994512
294		16		83	0.994512
295	16			83	0.994512
305	85		14		0.993533
307		14		85	0.993533
308			14	85	0.993533
313		14	85		0.993533
320		85	14		0.993533
321	85			14	0.993533
326		14	85		0.993533
393		16		83	0.994512
394			16	83	0.994512
396	83		16		0.994512
397	16			83	0.994512
398		16		83	0.994512
401		83		16	0.994512
402	83		16		0.994512
404	71	28			1.0
405			85	14	0.993533
406	71		14	14	0.984337
407	71	14		14	0.984337
408		85	14		0.993533
409	83			16	0.994512
410		16	16		0.988813
411	83			16	0.994512
413	16	83			0.994512
415	83			16	0.994512
416			83	16	0.994512
420			83	16	0.994512
422	83			16	0.994512
423		16		83	0.994512
424	16			83	0.994512
427		16		83	0.994512
428	16		83		0.994512
443		50	50		1.0
517	50		50		1.0
530		50		50	1.0
674		33	66		0.997452
710		40		60	1.0
740		50		50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain