SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene4899

Length: 571 nt

UniGene Fasta

>uagpf_v2_unigene4899
CGTCGTGACCTTGGCTGTCACTCATGGCGTCTTGACCTTGGCTGTCCCTGCATACTCAGCTTTCCGTGAGGCCAGTTATGGCCATGCTATGCTGGAGATCATGAACCGCACCCATGCCTATTATTACTGGAACCGCAATGATGATGGTGTATTTGTGGCGTCAGATTCAATTTGGTTGCACAACCGATATTGGTCGAGTAAACTCCAAATGCATCCAAGGAACAGACCAAATGAAGCTCATGAAAACATCAATACTGACCACCAGAAGATGCGGTCTGTATCATCAAAATTTACCAAGGAACCAAAGATTCCCTGGGGTATTGAAGGACATACTGTGAAGTTATGCGTATTTAACATGCAAAATTTTCTAGCTTGAACATATTGAGTTTATGTACAGTGCATTTTATGGCCATTCATTCTCTGTCCAATTGGACCGAAAGAAGTGATTCTTGTTAGGTACTTAATGGCTCCTTTGGAATGGATTTTATATTCCATAAGTTAGCTTATGGATTAGAGAAATAAATGTGACATCGTAAAATAGTCAATATATATAGAATTATCTGGGCTTCGC

Ace file of the UniGene uagpf_v2_unigene4899

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene11905	4/4

Source	Descriptions	Term	Type	Identity
AutoFact	Acid phosphatase n=4 Tax=Oryza sativa RepID=Q67WU6_ORYSJ	-	-	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	65%
Blast2go	purple acid phosphatase-like protein	-	-	83%

Source	ECs	Term	Type	e value	Identity
Blast2go	Acid phosphatase.	EC:3.1.3.2	-	0.0	83%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Aminobenzoate degradation	00627		0.0	83%
Blast2go	Riboflavin metabolism	00740		0.0	83%

Source	GOs	Term	Type	Identity
Blast2go	protein dephosphorylation	GO:0006470	Biological Process	83%
Blast2go	metal ion binding	GO:0046872	Molecular Function	83%
Blast2go	protein serine/threonine phosphatase activity	GO:0004722	Molecular Function	83%
Blast2go	acid phosphatase activity	GO:0003993	Molecular Function	83%
Blast2go	protein serine/threonine phosphatase complex	GO:0008287	Cellular Component	83%

Source	InterPros	Term	Type	Identity
Sma3	Fibronectin, type III	IPR003961	-	-
Sma3	Metallophosphoesterase domain	IPR004843	-	-
Sma3	Fatty acid hydroxylase	IPR006694	-	-
Sma3	Purple acid phosphatase, N-terminal	IPR015914	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NVR5

Fln msg: your sequence is shorter than subject: 125 - 517

Fln protein: VVTLAVTHGVLTLAVPAYSAFREASYGHAMLEIMNRTHAYYYWNRNDDGVFVASDSIWLHNRYWSSKLQMHPRNRPNEAHENINTDHQKMRSVSSKFTKEPKIPWGIEGHTVKLCVFNMQNFLA*

Protein Length: 126

Fln nts: CGTCGTGACCTTGGCTGTCACTCATGGCGTCTTGACCTTGGCTGTCCCTGCATACTCAGCTTTCCGTGAGGCCAGTTATGGCCATGCTATGCTGGAGATCATGAACCGCACCCATGCCTATTATTACTGGAACCGCAATGATGATGGTGTATTTGTGGCGTCAGATTCAATTTGGTTGCACAACCGATATTGGTCGAGTAAACTCCAAATGCATCCAAGGAACAGACCAAATGAAGCTCATGAAAACATCAATACTGACCACCAGAAGATGCGGTCTGTATCATCAAAATTTACCAAGGAACCAAAGATTCCCTGGGGTATTGAAGGACATACTGTGAAGTTATGCGTATTTAACATGCAAAATTTTCTAGCTTGA___ACATATTGAGTTTATGTACAGTGCATTTTATGGCCATTCATTCTCTGTCCAATTGGACCGAAAGAAGTGATTCTTGTTAGGTACTTAATGGCTCCTTTGGAATGGATTTTATATTCCATAAGTTAGCTTATGGATTAGAGAAATAAATGTGACATCGTAAAATAGTCAATATATATAGAATTATCTGGGCTTCGC

Fln Alignment:

Contig4899___GVLTLAVPAYSAFREASYGHAMLEIMNRTHAYYYWNRNDDGVFVASDSIWLHNRYWSSKLQMHPRNRPNEAHENINTDH
A9NVR5_______________GIFKEPQPAYSAFREASYGHAMLEIKNSSHAYYYWNRNEDGVSVASDSLWLYNQYWWSKRQINPRRRLKKNHDDMHTDH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain