SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene4692

Length: 812 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene4692

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2384	11/12

Source	Descriptions	Term	Type	Identity
AutoFact	Calcium-dependent protein kinase, putative n=1 Tax=Ricinus communis RepID=B9R931_RICCO	-	-	76%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	66%
Blast2go	calcium-dependent protein	-	-	87%

Source	ECs	Term	Type	e value	Identity
Blast2go	Calcium/calmodulin-dependent protein kinase.	EC:2.7.11.17	-	0.0	87%

Source	GOs	Term	Type	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	87%
Blast2go	calmodulin-dependent protein kinase activity	GO:0004683	Molecular Function	87%
Blast2go	calcium ion binding	GO:0005509	Molecular Function	87%
Blast2go	ATP binding	GO:0005524	Molecular Function	87%

Source	InterPros	Term	Type	Identity
Sma3	Ribosomal protein S16	IPR000307	-	-
Sma3	Histidine phosphatase superfamily, clade-2	IPR000560	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Calcium-binding EF-hand	IPR002048	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Parvalbumin	IPR008080	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	EF-hand-like domain	IPR011992	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	EF-hand	IPR018248	-	-
Sma3	EF-HAND 2	IPR018249	-	-
Sma3	ATPase, P-type phosphorylation site	IPR018303	-	-

Full-Lengther Next Prediction

SNPs (tot: 71)

Position	A %	C %	G %	T %	Probability
108		33	66		0.997452
109	66		33		0.997452
112	66		33		0.997452
113	66			33	0.997452
115	75	25			0.996473
116	50	25	25		0.995533
117		25		75	0.996473
118		75		25	0.996473
119	50		25	25	0.995533
120	50		25	25	0.995533
122	25	75			0.996473
123	50	25		25	0.995533
124		25	75		0.996473
127	25			75	0.996473
128		75	25		0.996473
129			25	75	0.996473
131	25			75	0.996473
132	75		25		0.996473
134		25	50	25	0.995533
136		25		75	0.996473
138	75	25			0.996473
277			20	80	0.995493
280	80		20		0.995493
281	80			20	0.995493
282	80		20		0.995493
284		20	80		0.995493
292		80	20		0.995493
296	75	25			0.996473
298		25		75	0.996473
336		20	80		0.995493
337	80		20		0.995493
339		20	80		0.995493
340			20	80	0.995493
345	80			20	0.995493
346	80			20	0.995493
348	80		20		0.995493
349	80	20			0.995493
352			80	20	0.995493
355		20		80	0.995493
356			80	20	0.995493
358	20			80	0.995493
401	83			16	0.994512
402	83	16			0.994512
403			16	83	0.994512
404			83	16	0.994512
408	83	16			0.994512
409	83			16	0.994512
412	83	16			0.994512
416			83	16	0.994512
441			20	80	0.995493
443		20		80	0.995493
446		80		20	0.995493
447	80		20		0.995493
449	80	20			0.995493
450	80	20			0.995493
451	80			20	0.995493
454		80	20		0.995493
456	80			20	0.995493
458		20		80	0.995493
459		20	80		0.995493
460	20		80		0.995493
464	20	20			0.99255
465	83		16		0.994512
467	83	16			0.994512
468			16	83	0.994512
472	83	16			0.994512
473		16	83		0.994512
477	83	16			0.994512
480	83	16			0.994512
481	16		83		0.994512
484	16			83	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain