SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene4557

Length: 740 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene4557

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene21016	11/11

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF21 domain containing protein	-	-	1.0e-35	31%
FL-Next	sp=DUF21 domain-containing protein At2g14520; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	72%
Blast2go	duf21 domain-containing protein at2g14520-like	-	-	0.0	85%

Source	InterPros	Term	Type	Identity
Sma3	Cystathionine beta-synthase, core	IPR000644	-	-
Sma3	Flavodoxin	IPR001094	-	-
Sma3	Integrase, catalytic core	IPR001584	-	-
Sma3	Domain of unknown function DUF21	IPR002550	-	-
Sma3	Putative S-adenosyl-L-methionine-dependent methyltransferase	IPR004159	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Radical SAM	IPR007197	-	-
Sma3	Flavodoxin/nitric oxide synthase	IPR008254	-	-
Sma3	tRNA wybutosine-synthesis	IPR013917	-	-

Full-Lengther Next Prediction

SNPs (tot: 29)

Position	A %	C %	G %	T %	Probability
59			20	80	0.995493
64	80			20	0.995493
68	80	20			0.995493
69			80	20	0.995493
74		20		80	0.995493
77	20	80			0.995493
114		16		83	0.994512
117		16		83	0.994512
118			16	83	0.994512
122		16		83	0.994512
123	83	16			0.994512
125		83		16	0.994512
126			16	83	0.994512
129			16	83	0.994512
130	83			16	0.994512
132	16			83	0.994512
133		16		83	0.994512
135		16	83		0.994512
192	85	14			0.993533
195		14		85	0.993533
199		14	85		0.993533
201	85			14	0.993533
202			85	14	0.993533
203		85	14		0.993533
204	85		14		0.993533
205	85	14			0.993533
208			85	14	0.993533
282	18		81		0.999994
429			80	20	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain