SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene4470

Length: 702 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene4470

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene8229	14/20
SustainPine v2.0	sp_v2.0_unigene64012	5/20

Source	Descriptions	Term	Type	Identity
AutoFact	Short-chain dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9SPD4_RICCO	-	-	68%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	80%
Blast2go	short-chain dehydrogenase reductase sdr	-	-	79%

Source	ECs	Term	Type	e value	Identity
Blast2go		EC:1.1.1.10-	-	0.0	79%

Source	GOs	Term	Type	Identity
Blast2go	folic acid-containing compound metabolic process	GO:0006760	Biological Process	79%
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	79%
Blast2go	3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity	GO:0004316	Molecular Function	79%
Blast2go	binding	GO:0005488	Molecular Function	79%
Blast2go	cytosol	GO:0005829	Cellular Component	79%

Source	InterPros	Term	Type	Identity
Sma3	Short-chain dehydrogenase/reductase SDR	IPR002198	-	-
Sma3	Glucose/ribitol dehydrogenase	IPR002347	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-

Full-Lengther Next Prediction

SNPs (tot: 56)

Position	A %	C %	G %	T %	Probability
55	75		25		0.996473
58	75		25		0.996473
59			75	25	0.996473
62		25		75	0.996473
63		25	75		0.996473
64			75	25	0.996473
65			75	25	0.996473
68			25	75	0.996473
70			75	25	0.996473
71			25	75	0.996473
75	25		75		0.996473
78		25	75		0.996473
79	25	75			0.996473
116	80	20			0.995493
117	80		20		0.995493
119	80	20			0.995493
121	80			20	0.995493
123	20		80		0.995493
124		20	80		0.995493
125		20		80	0.995493
128	80		20		0.995493
129	80		20		0.995493
131	80			20	0.995493
132	80	20			0.995493
133	75	25			1.0
134		12	87		0.992554
141	25		75		1.0
143		25		75	1.0
144	75			25	1.0
145	75			25	1.0
146	75		25		1.0
148	75	25			1.0
149	75			25	1.0
158	75			25	1.0
159		25	75		1.0
160	25		75		1.0
232		20	80		0.999996
233		80	20		0.999996
242			20	80	0.999996
243	80	20			0.999996
245		75	25		1.0
246	75			25	1.0
247		25	75		1.0
250		75		25	1.0
252	25	75			1.0
298	90	10			0.90298
300		90		10	0.90298
304	90			10	0.90298
307		10		90	0.90298
308	90	10			0.90298
309	90			10	0.90298
316		10		90	0.90298
391		58	8	33	1.0
400	90	10			0.90298
401	10			90	0.90298
541	77		22		0.999999

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain