SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene4169

Length: 937 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene4169

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene5871	7/10

Source	Descriptions	Term	Type	Identity
AutoFact	protein kinase-like protein [Vitis aestivalis]	-	-	85%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Blast2go	protein kinase family protein	-	-	83%

Source	ECs	Term	Type	e value	Identity
Blast2go	Non-specific protein-tyrosine kinase.	EC:2.7.10.2	-	0.0	83%
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	0.0	83%

Source	GOs	Term	Type	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	83%
Blast2go	receptor activity	GO:0004872	Molecular Function	83%
Blast2go	non-membrane spanning protein tyrosine kinase activity	GO:0004715	Molecular Function	83%
Blast2go	ATP binding	GO:0005524	Molecular Function	83%
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	83%
Blast2go	plasma membrane	GO:0005886	Cellular Component	83%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Zinc finger, C2H2	IPR007087	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	ABC transporter, conserved site	IPR017871	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-

Full-Lengther Next Prediction

SNPs (tot: 31)

Position	A %	C %	G %	T %	Probability
47	25	75			0.996473
188	83	16			0.994512
191	83	16			0.994512
192			16	83	0.994512
194			16	83	0.994512
196		20		80	0.995493
197	83			16	0.994512
198		14		85	0.993533
200			14	85	0.993533
203	14	71	14		0.984337
204		16		83	0.994512
206	16			83	0.994512
207		16		83	0.994512
208			16	83	0.994512
209		33		66	1.0
210	16			83	0.994512
211	83		16		0.994512
213	16			83	0.994512
214		16		83	0.994512
270	83	16			0.994512
272	83			16	0.994512
275		83	16		0.994512
280			83	16	0.994512
281		83		16	0.994512
282	83		16		0.994512
284	83	16			0.994512
285			83	16	0.994512
287		83		16	0.994512
290			83	16	0.994512
291		16	83		0.994512
292	16		83		0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain