SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene4014

Length: 603 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene4014

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene13999	9/9

Source	Descriptions	Term	Type	e value	Identity
AutoFact	mitotic cyclin a2-type [Glycine max]	-	-	6.0e-40	63%
FL-Next	Isoform 2 of Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3	-	-	0.0	58%
Blast2go	protein	-	-	0.0	75%

Source	GOs	Term	Type	Identity
Blast2go	cell cycle	GO:0007049	Biological Process	75%
Blast2go	cell division	GO:0051301	Biological Process	75%
Blast2go	nucleus	GO:0005634	Cellular Component	75%

Source	InterPros	Term	Type	Identity
Sma3	Cyclin, C-terminal	IPR004367	-	-
Sma3		IPR006670	-	-
Sma3	Cyclin, N-terminal	IPR006671	-	-
Sma3	Mannosyltransferase, DXD	IPR007704	-	-
Sma3	Cyclin-like	IPR013763	-	-
Sma3	Cyclin A/B/D/E	IPR014400	-	-
Sma3	Cyclin A, G2/mitotic-specific	IPR015453	-	-

Full-Lengther Next Prediction

SNPs (tot: 33)

Position	A %	C %	G %	T %	Probability
84		20	80		0.995493
85	80		20		0.995493
87	80	20			0.995493
88			20	80	0.995493
89		80		20	0.995493
90	80		20		0.995493
94	80			20	0.995493
96		80	20		0.995493
97	80		20		0.995493
98		20	80		0.995493
99	80			20	0.995493
102	20			80	0.995493
104		80		20	0.995493
105	80	20			0.995493
273			20	80	0.995493
276		80	20		0.995493
280	80	20			0.995493
283	80	20			0.995493
286	80			20	0.995493
287		20		80	0.995493
289	80	20			0.995493
290			80	20	0.995493
291		20	80		0.995493
326	85		14		0.993533
328	85		14		0.993533
332	85	14			0.993533
335		85	14		0.993533
336		85	14		0.993533
342	85			14	0.993533
343		14	85		0.993533
345		14	85		0.993533
347		14	85		0.993533
348	14	85			0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain