SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene4008

Length: 852 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene4008

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene9029	33/36

Source	Descriptions	Term	Type	Identity
AutoFact	Prohibitin n=4 Tax=core eudicotyledons RepID=O04361_TOBAC	-	-	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	56%
Blast2go	prohibitin	-	-	92%

Source	GOs	Term	Type	Identity
Blast2go	cell growth	GO:0016049	Biological Process	92%
Blast2go	response to salt stress	GO:0009651	Biological Process	92%
Blast2go	cell division	GO:0051301	Biological Process	92%
Blast2go	response to auxin stimulus	GO:0009733	Biological Process	92%
Blast2go	mitochondrion organization	GO:0007005	Biological Process	92%
Blast2go	lateral root development	GO:0048527	Biological Process	92%
Blast2go	response to nitric oxide	GO:0071731	Biological Process	92%
Blast2go	mitochondrial respiratory chain complex I	GO:0005747	Cellular Component	92%
Blast2go	nucleolus	GO:0005730	Cellular Component	92%
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	92%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	92%
Blast2go	chloroplast	GO:0009507	Cellular Component	92%
Blast2go	plasma membrane	GO:0005886	Cellular Component	92%

Source	InterPros	Term	Type	e value	Identity
Sma3	Band 7 protein	IPR001107	-	0.0	-
Sma3	Prohibitin	IPR000163	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 52)

Position	A %	C %	G %	T %	Probability
133		57	42		1.0
134	14			85	0.993533
136		71	28		1.0
137			57	42	1.0
138			85	14	0.993533
139	28		71		1.0
140		28	71		1.0
141	57	42			1.0
142			57	42	1.0
143			71	28	1.0
144			85	14	0.993533
145		14	85		0.993533
146	71	28			1.0
147		71		28	1.0
148	57		28	14	1.0
149		71		28	1.0
150	14	28			1.0
152		28		71	1.0
154		28		71	1.0
155	28	71			1.0
182		85		14	0.993533
201	85	14			0.993533
317			40	60	1.0
320	60		40		1.0
368		33	66		1.0
434	57		42		1.0
443	14		85		0.993533
517		16	83		0.994512
520		16	83		0.994512
521		83	16		0.994512
525		16	83		0.994512
526		16		83	0.994512
529			16	83	0.994512
530		83	16		0.994512
533	83			16	0.994512
535			83	16	0.994512
537	16		83		0.994512
538		16	83		0.994512
546			83	16	0.994512
547	83			16	0.994512
548	83	16			0.994512
561	83			16	0.994512
562	16		66	16	0.988813
565		16	83		0.994512
567			83	16	0.994512
568	83			16	0.994512
576		16	83		0.994512
578		16	83		0.994512
579	83			16	0.994512
580		16	83		0.994512
661	84	15			0.999986
860	33			66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain