SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene4003

Length: 617 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene4003

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3545	10/11

Source	Descriptions	Term	Type	Identity
AutoFact	Fyve finger-containing phosphoinositide kinase, fyv1, putative n=1 Tax=Ricinus communis RepID=B9T3Y2_RICCO	-	-	82%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	fyve finger-containing phosphoinositide	-	-	90%

Source	ECs	Term	Type	e value	Identity
Blast2go		EC:2.7.1.15-	-	0.0	90%

Source	GOs	Term	Type	Identity
Blast2go	phosphatidylinositol phosphorylation	GO:0046854	Biological Process	90%
Blast2go	cellular protein metabolic process	GO:0044267	Biological Process	90%
Blast2go	ATP binding	GO:0005524	Molecular Function	90%
Blast2go	1-phosphatidylinositol-3-phosphate 5-kinase activity	GO:0000285	Molecular Function	90%
Blast2go	zinc ion binding	GO:0008270	Molecular Function	90%

Source	InterPros	Term	Type	Identity
Sma3	Zinc finger, FYVE-type	IPR000306	-	-
Sma3	Serine hydroxymethyltransferase	IPR001085	-	-
Sma3	Chaperonin Cpn60/TCP-1	IPR002423	-	-
Sma3	Phosphatidylinositol-4-phosphate 5-kinase, core	IPR002498	-	-
Sma3	Zinc finger, FYVE-related	IPR017455	-	-
Sma3	Intermediate filament protein, conserved site	IPR018039	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-

Full-Lengther Next Prediction

SNPs (tot: 33)

Position	A %	C %	G %	T %	Probability
129		33	66		0.997452
131		33	33	33	0.997753
132		33		66	0.997452
133	33		66		1.0
134	33			66	1.0
135	33	33	33		0.997753
137		33	33		0.997753
142	33		33	33	0.997753
144		33	66		0.997452
147			33	66	0.997452
150	33			66	0.997452
151		33		66	0.997452
152			66	33	0.997452
153		33	66		0.997452
154	33			66	0.997452
195	75	25			0.996473
200	75		25		0.996473
201	75			25	0.996473
204	80	20			0.995493
205		20	80		0.995493
207			80	20	0.995493
209			40	60	1.0
210	20		20	60	0.99255
212		80		20	0.995493
213			80	20	0.995493
214	60		20	20	0.99255
215	60	20	20		0.99255
216	80	20			0.995493
217		20	60	20	0.99255
218			80	20	0.995493
219		80		20	0.995493
220	20	80			0.995493
223		20	80		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain