SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene3715

Length: 916 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene3715

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2592	19/29
SustainPine v2.0	sp_v2.0_unigene76865	8/29

Source	Descriptions	Term	Type	Identity
AutoFact	Protein disulfide isomerase like protein n=3 Tax=Glycine max RepID=C4T848_SOYBN	-	-	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	40%
Blast2go	protein disulfide isomerase l-3b	-	-	71%

Source	ECs	Term	Type	e value	Identity
Blast2go	Protein disulfide-isomerase.	EC:5.3.4.1	-	0.0	71%

Source	GOs	Term	Type	Identity
Blast2go	transferase activity, transferring glycosyl groups	GO:0016757	Molecular Function	71%
Blast2go	protein disulfide isomerase activity	GO:0003756	Molecular Function	71%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	71%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	71%

Source	InterPros	Term	Type	Identity
Sma3		IPR012335	-	-
Sma3	Thioredoxin domain	IPR013766	-	-
Sma3		IPR017936	-	-
Sma3	Thioredoxin, conserved site	IPR017937	-	-

Full-Lengther Next Prediction

SNPs (tot: 88)

Position	A %	C %	G %	T %	Probability
190		25		75	0.996473
191			25	75	0.996473
192	75			25	0.996473
194	75		25		0.996473
195	75			25	0.996473
197	25			75	0.996473
199	75	25			0.996473
200			75	25	0.996473
201	75			25	0.996473
203		75	25		0.996473
205		75		25	0.996473
206	75		25		0.996473
293			40	60	1.0
294	60			40	1.0
296			40	60	1.0
297	60			40	1.0
300		40	60		1.0
305			40	60	1.0
306	60	40			1.0
316		20	60		0.99255
317	20	20	60		0.99255
318	20			80	0.995493
330	83		16		0.994512
332	83	16			0.994512
333		16		83	0.994512
334		83		16	0.994512
337			16	83	0.994512
338		16	83		0.994512
339	83			16	0.994512
342	85		14		0.993533
343	71	14		14	0.984337
344		14	71	14	0.984337
345		14	14	71	0.984337
346	14			85	0.993533
347	85		14		0.993533
350	85	14			0.993533
351			85	14	0.993533
352	85			14	0.993533
353	85		14		0.993533
354	85		14		0.993533
355	85	14			0.993533
356	85			14	0.993533
359	85	14			0.993533
360	14		85		0.993533
362	85			14	0.993533
363	85	14			0.993533
392		11		88	0.923564
395	88	11			0.923564
397		88		11	0.923564
398	88		11		0.923564
400	88	11			0.923564
401		11	88		0.923564
402	88			11	0.923564
404			11	88	0.923564
406	88	11			0.923564
411	11			88	0.923564
433			10	90	0.90298
434		90		10	0.90298
436	90		10		0.90298
437			90	10	0.90298
439	10			90	0.90298
440		50		50	1.0
441		10	90		0.90298
442	90			10	0.90298
444	90		10		0.90298
445		90	10		0.90298
448	90		10		0.90298
455		10	90		0.90298
456	11			88	0.923564
473		90		10	0.90298
476	90		10		0.90298
482	90	10			0.90298
483	90			10	0.90298
484	90			10	0.90298
485	90		10		0.90298
488	80	13		6	0.999961
491		86	13		0.999973
494		13		86	0.999973
496	86			13	0.999973
497	86			13	0.999973
498	86		13		0.999973
543	83	16			1.0
545	83			16	1.0
548	83		16		1.0
553			82	17	1.0
554	82			17	1.0
558	82		17		1.0
559		82		17	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain