SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene3559

Length: 741 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene3559

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene36383	7/12
SustainPine v2.0	sp_v2.0_unigene36506	4/12

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cytochrome b561/ferric reductase transmembrane family protein n=3 Tax=Arabidopsis RepID=O49729_ARATH	-	-	2.0e-14	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	89%
Blast2go	cytochrome b561 ferric reductase transmembrane family protein	-	-	0.0	75%

Source	InterPros	Term	Type	e value	Identity
Sma3	Cytochrome b561/ferric reductase transmembrane	IPR006593	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 35)

Position	A %	C %	G %	T %	Probability
204		11		88	0.923564
205			11	88	0.923564
207		11	88		0.923564
208	88		11		0.923564
209			88	11	0.923564
212	88	11			0.923564
213	88	11			0.923564
214		88		11	0.923564
215	88			11	0.923564
217	88		11		0.923564
218		11		88	0.923564
222	88			11	0.923564
223	88	11			0.923564
225	88	11			0.923564
227		11		88	0.923564
233	22	77			0.999999
237		90		10	0.90298
238	90		10		0.90298
240	90	10			0.90298
243	90			10	0.90298
248	90		10		0.90298
252	90			10	0.90298
286	70			30	1.0
326	81	18			0.999994
330	90		10		0.90298
331	80	20			0.999996
332	77	11		11	0.968132
333	77		11	11	0.968132
336	11		11	77	0.968132
337		22		77	0.999999
339		11	88		0.923564
340	11	88			0.923564
345		11		88	0.923564
346	11			88	0.923564
439	57			42	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain