SustainPineDB

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Assembly info
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene3259

Length: 452 nt

UniGene Fasta

>uagpf_v2_unigene3259
CGTCGTGACCTTGGCTGTCACTCAGCAAAGAACCGTCGTGACCTTGGCTGTCACTCATGTTGAGAGATGCAAATTTCCCCAAGATGGATCATCTCCCAAGTCTCTCAGATATATTGGAAGCATGGTAGCTGATGTGCACAGAACCTTACTCTATGGCGGTATTTTCATGTACCCTGCGGATAAGAAGAGTCCCAATGGAAAATTGCGTGTTCTGTACGAAGTGTTCCCCATGTCATTCTTAATGGAACAAGCAGGAGGTCAAGCTTTTACAGGAAGCATACGAGCACTTGATTTGGTTCCCACTAAGATTCACCAACGTTCCCCTGTCTTTCTTGGGAGTTATGATGATGTGGAGGAGATTAAGGCTCTGTACGCAGCACAGGAAGGGAAGGTTTAAAAGTCCGTCCATGAATAGGCAATTGTATTTTCTAAGGATTGATGACTAATGTTAG

Ace file of the UniGene uagpf_v2_unigene3259

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene25206	6/7

Source	Descriptions	Term	Type	Identity
AutoFact	RecName: Full=Fructose-1,6-bisphosphatase, cytosolic; Short=FBPase; AltName: Full=D-fructose-1,6-bisphosphate 1-phosphohydrolase emb\|CAA43860.1\| fructose-bisphosphatase [Spinacia oleracea]	-	-	90%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	98%
Blast2go	fructose- -bisphosphatase	-	-	95%

Source	InterPros	Term	Type	e value	Identity
Sma3	Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase	IPR000146	-	0.0	-
Sma3		IPR017955	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NRG3

Fln msg: your sequence is shorter than subject: 132 - 341

Fln protein: VVTLAVTQQRTVVTLAVTHVERCKFPQDGSSPKSLRYIGSMVADVHRTLLYGGIFMYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGSIRALDLVPTKIHQRSPVFLGSYDDVEEIKALYAAQEGKV*

Protein Length: 133

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGCAAAGAACCGTCGTGACCTTGGCTGTCACTCATGTTGAGAGATGCAAATTTCCCCAAGATGGATCATCTCCCAAGTCTCTCAGATATATTGGAAGCATGGTAGCTGATGTGCACAGAACCTTACTCTATGGCGGTATTTTCATGTACCCTGCGGATAAGAAGAGTCCCAATGGAAAATTGCGTGTTCTGTACGAAGTGTTCCCCATGTCATTCTTAATGGAACAAGCAGGAGGTCAAGCTTTTACAGGAAGCATACGAGCACTTGATTTGGTTCCCACTAAGATTCACCAACGTTCCCCTGTCTTTCTTGGGAGTTATGATGATGTGGAGGAGATTAAGGCTCTGTACGCAGCACAGGAAGGGAAGGTTTAA___AAGTCCGTCCATGAATAGGCAATTGTATTTTCTAAGGATTGATGACTAATGTTAG

Fln Alignment:

Contig3259___HVERCKFPQDGSSPKSLRYIGSMVADVHRTLLYGGIFMYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGSIRALDLVPTKIHQRSPVFLGSYDDVEEIKALYAAQEGK
A9NRG3_______________YVERCKFPQDGSSPKSLRYIGSMVADVHRTLLYGGIFMYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGNIRALDLVPTKIHQRSPVFLGSYDDVEEIKALYAAQEGK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain