SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene3229

Length: 1032 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene3229

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene11707	21/24
SustainPine v2.0	sp_v2.0_unigene79274	2/24

Source	Descriptions	Term	Type	Identity
AutoFact	Vacuole membrane protein, putative n=1 Tax=Ricinus communis RepID=B9RSQ1_RICCO	-	-	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	83%
Blast2go	snare associated golgi protein	-	-	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	membrane	GO:0016020	Cellular Component	0.0	72%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	0.0	72%

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome b5	IPR001199	-	-
Sma3	Ribokinase	IPR002139	-	-
Sma3	Carbohydrate/purine kinase	IPR011611	-	-

Full-Lengther Next Prediction

SNPs (tot: 44)

Position	A %	C %	G %	T %	Probability
380	83	16			0.994512
382			83	16	0.994512
383	80	20			0.995493
384	80		20		0.995493
385	80			20	0.995493
387	20		80		0.995493
389	80	20			0.995493
390	80			20	0.995493
391	80			20	0.995493
394	80		20		0.995493
395	60	40			1.0
396	20	60		20	0.99255
397	80		20		0.995493
398	60	20		20	0.99255
400	40	60			1.0
402	60			40	1.0
403		40		60	1.0
404	20	60			0.99255
435	83	16			0.994512
441		16		83	0.994512
444			83	16	0.994512
445		83	16		0.994512
447	83	16			0.994512
448	83			16	0.994512
449		83	16		0.994512
452	16			83	0.994512
453	83	16			0.994512
454	83			16	0.994512
455	83	16			0.994512
475	85	14			0.993533
476	85		14		0.993533
480			14	85	0.993533
482	85	14			0.993533
487	85			14	0.993533
490		14	85		0.993533
492		14	85		0.993533
493	85			14	0.993533
494	85	14			0.993533
495	14			85	0.993533
638		10		89	0.999919
641	84	5			0.999846
643	84		10	5	0.999846
651			11	88	0.999937
653		5	11	83	0.999887

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain