SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene3118

Length: 846 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene3118

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene10988	16/17

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	protein transport protein sft1	-	-	82%

Source	GOs	Term	Type	e value	Identity
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	82%

Source	InterPros	Term	Type	e value	Identity
Sma3	Target SNARE coiled-coil domain	IPR000727	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 34)

Position	A %	C %	G %	T %	Probability
110			83	16	0.994512
111	16		83		0.994512
114	16	83			0.994512
115	83	16			0.994512
121	83			16	0.994512
123			83	16	0.994512
129	83	16			0.994512
130	16		83		0.994512
228	40		60		1.0
235		14	85		0.993533
238		14	85		0.993533
239		85	14		0.993533
241		85	14		0.993533
242	14	85			0.993533
243	85	14			0.993533
244		14		85	0.993533
254		14	85		0.993533
255			85	14	0.993533
257	14	85			0.993533
289			14	14	0.984337
290	14			85	0.993533
456		16		83	0.994512
458	83			16	0.994512
461	83		16		0.994512
465		16		83	0.994512
467	83			16	0.994512
468	83			16	0.994512
469	83		16		0.994512
475	83	16			0.994512
476			83	16	0.994512
569	11			88	0.923564
570		11	88		0.923564
572		11		88	0.923564
573	11			88	0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain