SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene2960

Length: 635 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene2960

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3326	12/14

Source	Descriptions	Term	Type	Identity
AutoFact	forkhead-associated (FHA) domain-containing protein [Arabidopsis thaliana] gb\|ACJ23185.1\| parallel spindle 1 [Arabidopsis thaliana] gb\|AEE31701.1\| forkhead-associated (FHA) domain-containing protein [Arabidopsis thaliana]	-	-	44%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	53%
Blast2go	forkhead-associated domain-containing protein	-	-	63%

Source	GOs	Term	Type	e value	Identity
Blast2go	pollen development	GO:0009555	Biological Process	0.0	63%
Blast2go	membrane	GO:0016020	Cellular Component	0.0	63%

Source	InterPros	Term	Type	e value	Identity
Sma3	Forkhead-associated (FHA) domain	IPR000253	-	0.0	-
Sma3	Nucleotide binding protein, PINc	IPR006596	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
89		83	16		0.994512
90	83			16	0.994512
91	83	16			0.994512
95		16	83		0.994512
96		16		83	0.994512
99			16	83	0.994512
103			83	16	0.994512
104		16	83		0.994512
106		16	83		0.994512
108		16		83	0.994512
109	16			83	0.994512
120	11		11	77	0.968132
121	88		11		0.923564
122		12		87	0.992554
124		87	12		0.992554
125	87			12	0.992554
126		12	87		0.992554
128	87	12			0.992554
129	87			12	0.992554
130		12	87		0.992554
131	12		87		0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain