SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene2728

Length: 1123 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene2728

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene1178	15/17

Source	Descriptions	Term	Type	Identity
AutoFact	6-phosphogluconate dehydrogenase NAD-binding domain-containing protein [Musa acuminata]	-	-	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	53%
Blast2go	protein	-	-	68%

Source	ECs	Term	Type	e value	Identity
Blast2go	Oxidoreductases, Acting on the CH-OH group of donors, With NAD(+) or NADP(+) as acceptor.	EC:1.1.1.-	-	0.0	68%

Source	KEGGs	Term	Identity
Blast2go	Fructose and mannose metabolism	00051	68%
Blast2go	Ascorbate and aldarate metabolism	00053	68%
Blast2go	Steroid hormone biosynthesis	00140	68%
Blast2go	Tetracycline biosynthesis	00253	68%
Blast2go	Glycine, serine and threonine metabolism	00260	68%
Blast2go	Benzoate degradation	00362	68%
Blast2go	Bisphenol degradation	00363	68%
Blast2go	Amino sugar and nucleotide sugar metabolism	00520	68%
Blast2go	Polyketide sugar unit biosynthesis	00523	68%
Blast2go	Linoleic acid metabolism	00591	68%
Blast2go	Xylene degradation	00622	68%
Blast2go	Chloroalkane and chloroalkene degradation	00625	68%
Blast2go	Nitrotoluene degradation	00633	68%
Blast2go	Butanoate metabolism	00650	68%
Blast2go	Carbon fixation pathways in prokaryotes	00720	68%
Blast2go	Retinol metabolism	00830	68%
Blast2go	Isoquinoline alkaloid biosynthesis	00950	68%
Blast2go	Glucosinolate biosynthesis	00966	68%
Blast2go	Insect hormone biosynthesis	00981	68%
Blast2go	Biosynthesis of unsaturated fatty acids	01040	68%
Blast2go	Biosynthesis of type II polyketide backbone	01056	68%
Blast2go	Biosynthesis of type II polyketide products	01057	68%
Blast2go	Biosynthesis of alkaloids derived from shikimate pathway	01063	68%
Blast2go	Metabolic pathways	01100	68%
Blast2go	Biosynthesis of secondary metabolites	01110	68%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	68%
Blast2go	binding	GO:0005488	Molecular Function	68%
Blast2go	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	GO:0016616	Molecular Function	68%

Source	InterPros	Term	Type	Identity
Sma3	Tyrosinase	IPR002227	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-
Sma3	6-phosphogluconate dehydrogenase, NADP-binding	IPR006115	-	-
Sma3		IPR006183	-	-
Sma3	Dehydrogenase, multihelical	IPR013328	-	-
Sma3	3-hydroxyacid dehydrogenase/reductase	IPR015815	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NZ37

Fln msg: Distance to subject end: 46 aas, your sequence is shorter than subject: 260 - 300

Fln protein: MGEEQFTAGRTRVGWVGTGVMGFAMCERVQAAGFQITVYARTPSKIKGLCEKGAVLVDSPMAVGERSDVIFTMLSNPSDVREVVLGTRGILSGVVTGSGTVLVDMTSSLPSLAREIFEEARAKGCESVDAPVSGGDKGAKDGTLAILAGGRAETVAKLDSLFRAMGSATYLGPPGSGQSCKIANQITVAANLGGLSEGLVFADKAGLDVSEYLSAVSRGAAGSKVMDLFGTRVIGRDFAPGGFADYMVKDLGMALQGAEE

Protein Length: 261

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGGGGATGAATGAAGGAAATGGGCATCAGACAGAAATTGCGTGGTTCGCCCAGGGAATGGGGATTTGGATGGTGGAAAATGGATACGCGTTGGTTTCGAATCCGGTTGCCTGGCATTGATGACATTGTGTGGAAGCTTGTCTGTGTTTTTGAGTCCATACTTCTCGTCCTGCTGCTCTCCTTTTTCTTCGTTTGCTGTGGGTGTAATCTGTAACCAGCCCTGACAATGGGGTTGGATTGCATAGGTGTCTCTGTTTGTACTTAGATATTTTGTTTGTTTGTCTGTCTGTGCGAAGATTTGAACTGTGGATCTGTGAGA_-_ATGGGGGAAGAACAGTTTACGGCAGGGCGTACGAGAGTGGGATGGGTGGGAACTGGCGTGATGGGGTTTGCAATGTGTGAGCGGGTGCAGGCCGCCGGCTTCCAGATAACAGTATATGCCCGGACGCCCAGTAAAATCAAAGGGCTTTGTGAAAAGGGCGCGGTTTTGGTGGATTCGCCCATGGCGGTTGGGGAACGGAGTGACGTTATCTTTACAATGCTCAGCAACCCTTCTGATGTCCGCGAGGTTGTCCTAGGAACTAGGGGCATACTCTCCGGCGTGGTCACCGGGAGTGGAACTGTCCTGGTCGATATGACCAGCAGCCTGCCCTCGCTTGCTAGAGAAATATTTGAAGAAGCCCGAGCTAAAGGCTGCGAATCCGTGGACGCGCCGGTGTCTGGCGGGGACAAAGGGGCTAAGGACGGCACTCTGGCTATCTTGGCGGGGGGCCGTGCGGAGACTGTGGCGAAGCTCGACTCCCTGTTTAGAGCTATGGGATCAGCGACTTATCTTGGGCCTCCAGGCTCAGGCCAGAGCTGCAAGATAGCGAATCAGATTACGGTTGCGGCGAACCTGGGAGGTCTGAGCGAGGGCCTGGTATTTGCTGACAAAGCTGGGCTGGATGTGTCCGAGTACTTATCGGCTGTTTCCCGGGGAGCGGCGGGATCGAAGGTCATGGACCTGTTTGGAACGAGGGTTATCGGCCGGGATTTTGCGCCTGGGGGTTTTGCAGATTATATGGTTAAAGATCTGGGAATGGCGTTGCAGGGCGCTGAGGAAAT

Fln Alignment:

Contig2728___AMCERVQAAGFQITVYARTPSKIKGLCEKGAVLVDSPMAVGERSDVIFTMLSNPSDVREVVLGTRXXXXXXXXXXXXXXXDMTSSLPSLAREIFEEARAKGCESVDAPVSGGDKGAKDGTLAILAGGRAETVAKLDSLFRAMGSATYLGPPGSGQSCKIANQITVAANLGGLSEGLVFADKAGLDVSEYLSAVSRGAAGSKVMDLFGTRVIGRDFAPGGFADYMVKDLGMALQGAEE
A9NZ37_______________AMCGHILSAGYSVTVFNRTLSKAQTLCDRGAIMVDSPKSVAAESDIVFTIVGYPQDVREVIIGENGVLQGLKPGGTVV--DMTTSEPSLAREIIDYAKQRGCESVDAPVSGGDKGAKAGALAIFAGGEETVVEGLKPLFDCMGKVTYMGGPGLGQCTKLGNQITIASTMVGLVEGMVYAHKAGLDVEMYIKAISAGAAGSRSLDLYADRILRRDFDPGFFVNHFVKDLGISLRECQQ

SNPs (tot: 54)

Position	A %	C %	G %	T %	Probability
265			60	40	1.0
278		16		83	0.994512
281			16	83	0.994512
284	16			83	0.994512
285	83	16			0.994512
289	83		16		0.994512
291	83			16	0.994512
292			16	16	0.988813
294	83	16			0.994512
295	16			83	0.994512
296		16		83	0.994512
298		16		83	0.994512
299	16		83		0.994512
462		12		87	0.992554
464		87		12	0.992554
466		87	12		0.992554
467			87	12	0.992554
473		87		12	0.992554
474		87		12	0.992554
475	87		12		0.992554
478	87			12	0.992554
479	75	12		12	0.975346
480	87			12	0.992554
481	75	25			1.0
482			12	87	0.992554
585	14	85			0.993533
608	14		85		0.993533
612		85		14	0.993533
621		85	14		0.993533
629		14		85	0.993533
631	57	14	28		1.0
648	14	85			0.993533
651		14	85		0.993533
654	14	85			0.993533
677		71		28	1.0
681			28	71	1.0
687	85		14		0.993533
693	80	20			0.995493
710		80	20		0.995493
716		40	60		1.0
744	20			80	0.995493
759	33		66		0.997452
771		66		33	0.997452
775		66		33	0.997452
783		66		33	0.997452
784	33			66	0.997452
830		20		80	0.995493
831			20	80	0.995493
832	80			20	0.995493
835		20	80		0.995493
843			80	20	0.995493
844	80		20		0.995493
851	80			20	0.995493
854	20			80	0.995493

SSRs (tot: 1)

Start position	End position	Sequence	Length
292	304	TTTG TTTG TTTG T	13

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain