SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene2093

Length: 949 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene2093

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene1479	22/27
SustainPine v2.0	sp_v2.0_unigene61542	1/27

Source	Descriptions	Term	Type	Identity
AutoFact	metallo-beta-lactamase family protein [Arabidopsis thaliana] gb\|AAM13147.1\| putative protein [Arabidopsis thaliana] gb\|AAO30054.1\| putative protein [Arabidopsis thaliana] dbj\|BAE98442.1\| hypothetical protein [Arabidopsis thaliana] gb\|AEE86243.1\| metallo-b	-	-	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	85%
Blast2go	metallo-beta-lactamase family protein	-	-	67%

Source	GOs	Term	Type	Identity
Blast2go	response to arsenic-containing substance	GO:0046685	Biological Process	67%
Blast2go	hydrolase activity	GO:0016787	Molecular Function	67%
Blast2go	plastid	GO:0009536	Cellular Component	67%

Source	InterPros	Term	Type	e value	Identity
Sma3	Beta-lactamase-like	IPR001279	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 22)

Position	A %	C %	G %	T %	Probability
30	80		20		0.995493
149		80	20		0.995493
170		16	66	16	0.988813
172			16	83	0.994512
175			66	33	1.0
177	83			16	0.994512
178		33	66		1.0
179	83	16			0.994512
180	66	16		16	0.988813
182		16	83		0.994512
183	83		16		0.994512
184	83	16			0.994512
185	83			16	0.994512
186			16	83	0.994512
190	83	16			0.994512
191			83	16	0.994512
192		16	83		0.994512
267		40		60	1.0
316			33	66	0.997452
330		66	33		0.997452
389			66	33	0.997452
460		33	66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain