SustainPineDB

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Assembly info
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene2037

Length: 430 nt

UniGene Fasta

>uagpf_v2_unigene2037
CGTCGTGACCTTGGCTGTCACTCACTTTCAAGGTAACATTATGGAATCTTTACACTCATAGTCCAAAATCAATTCAAAGGCCTTAACTGCAGGGCATCGTAGAGTAGCGTCCCGGTGCTGGTTCTAACAGTCTCGCTCATCTTTTTGCGTACGGAATATTGAACAACCATTGACAGGCGGAGGGGTAGAAGACTTAGCTGATTGAGGGAAGGCACACAGGGGAAAAATATGGCGGAAGAGGCAATTTTAGGGTTTTTACAGTCGCACGATGAGATTTCTCATTCAGGGGAGTTCGCTGCTTCCAAAGGGATCGACCATTCCGAGCTTTTGAATGTGATTAAGAGCCTCCATGGCTTCAGACTCGTTGACGCCCAGGATATTAAGAGTGAGAAGTGGATTCTTACTGAAGAAGGTGAAGCATACGCACTTC

Ace file of the UniGene uagpf_v2_unigene2037

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene25034	7/7

Source	Descriptions	Term	Type	Identity
AutoFact	phenylalanyl-tRNA synthetase alpha chain [Arabidopsis thaliana] sp\|Q9T034.3\|SYFA_ARATH RecName: Full=Probable phenylalanyl-tRNA synthetase alpha chain; AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS gb\|AAM19830.1\| AT4g39280/T22F8_180 [A	-	-	64%
FL-Next	sp=Probable phenylalanyl-tRNA synthetase alpha chain; Arabidopsis thaliana (Mouse-ear cress).	-	-	68%
Blast2go	protein	-	-	78%

Source	GOs	Term	Type	e value	Identity
Blast2go	cellular macromolecule metabolic process	GO:0044260	Biological Process	0.0	78%
Blast2go	primary metabolic process	GO:0044238	Biological Process	0.0	78%

Source	InterPros	Term	Type	Identity
Sma3	Transcription regulator HTH, MarR-type	IPR000835	-	-
Sma3	Phenylalanyl-tRNA synthetase	IPR002319	-	-
Sma3	Phenylalanyl-tRNA synthetase, class IIc, alpha subunit	IPR004529	-	-
Sma3	Aminoacyl-tRNA synthetase, class II	IPR006195	-	-
Sma3		IPR018157	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: sp_plants

Fln subject: Q9T034

Fln msg: Distance to subject end: 418 aas, your sequence is shorter than subject: 67 - 485

Fln protein: MAEEAILGFLQSHDEISHSGEFAASKGIDHSELLNVIKSLHGFRLVDAQDIKSEKWILTEEGEAYAL

Protein Length: 68

Fln nts: CGTCGTGACCTTGGCTGTCACTCACTTTCAAGGTAACATTATGGAATCTTTACACTCATAGTCCAAAATCAATTCAAAGGCCTTAACTGCAGGGCATCGTAGAGTAGCGTCCCGGTGCTGGTTCTAACAGTCTCGCTCATCTTTTTGCGTACGGAATATTGAACAACCATTGACAGGCGGAGGGGTAGAAGACTTAGCTGATTGAGGGAAGGCACACAGGGGAAAAAT_-_ATGGCGGAAGAGGCAATTTTAGGGTTTTTACAGTCGCACGATGAGATTTCTCATTCAGGGGAGTTCGCTGCTTCCAAAGGGATCGACCATTCCGAGCTTTTGAATGTGATTAAGAGCCTCCATGGCTTCAGACTCGTTGACGCCCAGGATATTAAGAGTGAGAAGTGGATTCTTACTGAAGAAGGTGAAGCATACGCACTTC

Fln Alignment:

Contig2037___MAEEAILGFLQSHDEISHSGEFAASKGIDHSELLNVIKSLHGFRLVDAQDIKSEKWILTEEGEAYA
Q9T034_______________MAEEAILGFLQNNEQITDSGQFSAEFNIDHNELVNVIKSLHGFRYIDVQDIKKETWILTDEGKKYA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain