SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene1876

Length: 1054 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene1876

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2573	13/15
SustainPine v2.0	sp_v2.0_unigene30392	2/15

Source	Descriptions	Term	Type	Identity
AutoFact	protein kinase [Triticum aestivum] dbj\|BAD19067.1\| protein kinase [Triticum aestivum] dbj\|BAD21354.1\| WNdr1A-like protein kinase [Triticum monococcum subsp. aegilopoides] dbj\|BAD21355.1\| WNdr1B-like protein kinase [Aegilops speltoides] dbj\|BAD21356.1\| WNd	-	-	79%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	protein kinase	-	-	88%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	0.0	88%

Source	GOs	Term	Type	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	88%
Blast2go	ATP binding	GO:0005524	Molecular Function	88%
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	88%

Source	InterPros	Term	Type	Identity
Sma3	AGC-kinase, C-terminal	IPR000961	-	-
Sma3	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	IPR000194	-	-
Sma3	Protein kinase, C-terminal	IPR017892	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-

Full-Lengther Next Prediction

SNPs (tot: 53)

Position	A %	C %	G %	T %	Probability
152		75		25	0.996473
153	75	25			0.996473
154		75	25		0.996473
156		75	25		0.996473
159	75	25			0.996473
162	75			25	0.996473
166	75			25	0.996473
172			75	25	0.996473
218		25		75	0.996473
219			75	25	0.996473
311		66		33	0.997452
313	33			66	0.997452
314	33	66			0.997452
315	33		66		0.997452
320		66		33	0.997452
327		66		33	0.997452
329	33		66		0.997452
334	33			66	0.997452
336	66	33			0.997452
373		25	75		0.996473
374	75		25		0.996473
376	75	25			0.996473
381	75	25			0.996473
384			75	25	0.996473
388	75	25			0.996473
389	75			25	0.996473
390		75	25		0.996473
397		25		75	0.996473
556		20	80		0.995493
558	80			20	0.995493
559	80	20			0.995493
561		80	20		0.995493
563		20	80		0.995493
565	75			25	0.996473
567			25	75	0.996473
568			25	75	0.996473
569		25		75	0.996473
572		75		25	0.996473
575		25	75		0.996473
576	75			25	0.996473
577		25	75		0.996473
578	25		75		0.996473
652		20	80		0.995493
656	80		20		0.995493
657			80	20	0.995493
659	20			80	0.995493
662	80			20	0.995493
667	80			20	0.995493
669	80			20	0.995493
670	80	20			0.995493
673	75	25			0.996473
675		25	75		0.996473
676	25	75			0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain