SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene1191

Length: 1054 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene1191

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3444	8/8

Source	Descriptions	Term	Type	Identity
AutoFact	S-adenosylmethionine-dependent methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SID2_RICCO	-	-	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	methyltransferase type 11	-	-	66%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring one-carbon groups, Methyltransferases.	EC:2.1.1.-	-	0.0	66%

Source	KEGGs	Term	Identity
Blast2go	Ubiquinone and other terpenoid-quinone biosynthesis	00130	66%
Blast2go	Tetracycline biosynthesis	00253	66%
Blast2go	Histidine metabolism	00340	66%
Blast2go	Tyrosine metabolism	00350	66%
Blast2go	Phenylalanine metabolism	00360	66%
Blast2go	Tryptophan metabolism	00380	66%
Blast2go	Benzoxazinoid biosynthesis	00402	66%
Blast2go	Selenocompound metabolism	00450	66%
Blast2go	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	66%
Blast2go	Polycyclic aromatic hydrocarbon degradation	00624	66%
Blast2go	Methane metabolism	00680	66%
Blast2go	Porphyrin and chlorophyll metabolism	00860	66%
Blast2go	Carotenoid biosynthesis	00906	66%
Blast2go	Phenylpropanoid biosynthesis	00940	66%
Blast2go	Flavonoid biosynthesis	00941	66%
Blast2go	Anthocyanin biosynthesis	00942	66%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	66%
Blast2go	Isoquinoline alkaloid biosynthesis	00950	66%
Blast2go	Insect hormone biosynthesis	00981	66%
Blast2go	Biosynthesis of type II polyketide products	01057	66%
Blast2go	Biosynthesis of alkaloids derived from shikimate pathway	01063	66%
Blast2go	Metabolic pathways	01100	66%
Blast2go	Biosynthesis of secondary metabolites	01110	66%

Source	GOs	Term	Type	Identity
Blast2go	methylation	GO:0032259	Biological Process	66%
Blast2go	methyltransferase activity	GO:0008168	Molecular Function	66%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	66%

Source	InterPros	Term	Type	e value	Identity
Sma3	Methyltransferase type 11	IPR013216	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NVW8

Fln msg:

Fln protein: MGKPGRDWMHVYAIYGVVTLAVTQVLTLLQGSVLSVSSFLFMAYFGQICHFLVRSFPFFPIQVCSFAAGFVGSLMALVAVCFFVTAANIWYSDVILHWKMSQRIVGMVGDWSNVKTALDIGCGRGILLNAVAMQLKKEGSSGRVVGMDLWLDGQKSMSSTLRTAAIEGVQEYVTCRSGDARNLPFMDNYFDVVVSAVFLHTVGKEFGHKSSAAAAERAKTLQEVVRVLKPGGMAIIWDLVYVPEYVQRLHELKMQEIRVSEFVPAFMVQSHIVSFRKPHHQVQLNGHDWRSSIA*

Protein Length: 296

Fln nts: CTGCATA_-_ATGGGGAAACCGGGCAGAGACTGGATGCATGTTTATGCAATATATGGCGTCGTGACCTTGGCTGTCACTCAGGTTTTAACTCTACTCCAGGGCTCTGTGCTCAGTGTTTCTTCTTTTTTGTTTATGGCCTACTTCGGCCAAATCTGCCACTTCCTGGTCAGATCTTTCCCGTTTTTCCCCATTCAAGTCTGTAGCTTCGCGGCCGGTTTTGTAGGTTCTTTGATGGCTCTGGTAGCGGTCTGTTTCTTCGTCACGGCGGCAAACATCTGGTATTCTGATGTGATCCTTCACTGGAAAATGTCTCAGAGAATAGTAGGCATGGTAGGCGATTGGTCCAATGTGAAAACCGCTTTGGACATCGGATGCGGGCGCGGGATTCTTCTCAATGCTGTGGCAATGCAGCTGAAGAAGGAAGGCAGCAGCGGGCGGGTAGTGGGAATGGATCTTTGGCTCGACGGGCAAAAATCGATGTCATCAACTCTGAGAACAGCGGCCATTGAAGGAGTCCAAGAATACGTTACTTGCAGAAGCGGGGACGCTCGGAATCTGCCGTTCATGGACAATTACTTTGACGTGGTGGTTTCCGCCGTTTTTCTCCACACAGTGGGCAAAGAATTCGGGCACAAGAGTTCTGCCGCGGCAGCCGAGCGAGCGAAAACGCTCCAAGAAGTGGTAAGGGTTCTAAAGCCAGGCGGGATGGCCATTATCTGGGACTTAGTATACGTTCCTGAGTATGTGCAGAGGCTTCATGAGCTCAAAATGCAAGAAATCAGGGTTTCTGAGTTCGTTCCGGCCTTCATGGTTCAAAGTCATATTGTTTCCTTCAGGAAACCCCATCACCAAGTCCAGCTCAACGGCCATGACTGGAGAAGTAGCATTGCATGA___TGAAAAATTTTCATCCTCCCATACCTTCAATCCAAGAAGAATAATCAAGAAGTTCTGCTATTTAAACCTTTCATCCGAAGGATGATCTTTATCTGAGAAGCAGCTGCATATAACTGTAAAAATATATGCAGTACTAGTGCTTAGTTATTATAATTTTACAGA

Fln Alignment:

Contig1191___MGKPGRDWMHVYAIYGXXXXXXXXXXXXXXGSVLSVSSFLFMAYFGQICHFLVRSFPFFPIQVCSFAAGFVGSLMALVAVCFFVTAANIWYSDVILHWKMSQRIVGMVGDWSNVKTALDIGCGRGILLNAVAMQLKKEGSSGRVVGMDLWLDGQKSMSSTLRTAAIEGVQEYVTCRSGDARNLPFMDNYFDVVVSAVFLHTVGKEFGHKSSAAAAERAKTLQEVVRVLKPGGMAIIWDLVYVPEYVQRLHELKMQEIRVSEFVPAFMVQSHIVSFRKPHHQVQLNGHDWRSSIA
A9NVW8_______________MGKAGRDWMHVYAIYGMDEWHSLVLTLLQ-GSVLSVSSFLFMTYFGQICHFLVRSFPFFPIQVCSFAAGFVGSLMALVAVCFFVTAANIWYSDVILHWKMSQRIVSMVGDWSNVKTALDIGCGRGILLNAVAMQLKKEGSSGRVVGMDLWLDGQKSMSSTLRTAAIEGVQEYVTCRSGDARNLPFMDNYFDVVVSAVFLHTVGKEFGHKSSAAAAERAKTLQEVVRVLKPGGMAIIWDLVYVPEYVQRLHELKMQEIRVSEFVPAFMVQSHIVSFRKPHHQVQLNGHDWRSSIA

SNPs (tot: 17)

Position	A %	C %	G %	T %	Probability
80		33	66		0.997452
83		33		66	0.997452
84			33	66	0.997452
86	66		33		0.997452
92	66			33	0.997452
93		83	16		0.994512
94			16	83	0.994512
96		66	16	16	0.988813
97	66		16	16	0.988813
98			83	16	0.994512
99	16	16	66		0.988813
100	16	16	66		0.988813
108		83		16	0.994512
114		16	83		0.994512
115	16			83	0.994512
116		16		83	0.994512
119	16			83	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain