SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene1046

Length: 816 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene1046

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2821	2/15
SustainPine v2.0	sp_v2.0_unigene6315	12/15
SustainPine v2.0	sp_v2.0_unigene6875	1/15

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative carboxyl-terminal proteinase [Gossypium hirsutum]	-	-	9.0e-35	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	55%
Blast2go	carboxyl-terminal proteinase-like protein	-	-	4.59647e-38	81%

Source	InterPros	Term	Type	e value	Identity
Sma3	Domain of unknown function DUF239	IPR004314	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 40)

Position	A %	C %	G %	T %	Probability
141		20	80		0.995493
142	80		20		0.995493
144		20		80	0.995493
149	80	20			0.995493
151	80			20	0.995493
152	80			20	0.995493
153	80		20		0.995493
156			80	20	0.995493
160	20			80	0.995493
161		20	80		0.995493
162	80			20	0.995493
163		20	80		0.995493
164	20		80		0.995493
176	71	28			1.0
178		71		28	1.0
179	71	28			1.0
180		71	28		1.0
181	71			28	1.0
182		71	28		1.0
184		28	71		1.0
185	71	28			1.0
187			71	28	1.0
191	71			28	1.0
194		28	71		1.0
195	28		71		1.0
310		87	12		0.992554
311	87			12	0.992554
314	87	12			0.992554
316			87	12	0.992554
317		87	12		0.992554
318			12	87	0.992554
319	87	12			0.992554
322	87			12	0.992554
325		12		87	0.992554
468		33		66	0.997452
648	71			28	1.0
654	28		71		1.0
656		28	71		1.0
731		66		33	1.0
766		75		25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain