SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene922

Length: 1057 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene922

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18276	28/30
SustainPine v2.0	sp_v2.0_unigene69484	1/30

Source	Descriptions	Term	Type	Identity
AutoFact	Eukaryotic translation initiation factor 5 n=4 Tax=Andropogoneae RepID=IF5_MAIZE	-	-	86%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	86%
Blast2go	eukaryotic translation initiation factor 5	-	-	91%

Source	InterPros	Term	Type	e value	Identity
Sma3	Translation initiation factor IF2/IF5	IPR002735	-	0.0	-
Sma3	eIF4-gamma/eIF5/eIF2-epsilon	IPR003307	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 59)

Position	A %	C %	G %	T %	Probability
108	80			20	0.995493
109		40	60		1.0
110	20			40	1.0
111		40		40	1.0
112	80	20			0.995493
116		20		80	0.995493
119	80	20			0.995493
120	20		80		0.995493
121		20	80		0.995493
124	20	80			0.995493
153			20	80	0.995493
166		88	11		0.923564
170		11	88		0.923564
171			88	11	0.923564
176		88		11	0.923564
177	88		11		0.923564
178	88			11	0.923564
179		11	88		0.923564
180	11		88		0.923564
181		11		88	0.923564
183		11		88	0.923564
184	11		88		0.923564
240	90	10			0.90298
241	90		10		0.90298
242	90			10	0.90298
243	90	10			0.90298
244			10	90	0.90298
248	90	10			0.90298
249	90	10			0.90298
250			90	10	0.90298
254	90			10	0.90298
256		90		10	0.90298
257		10	90		0.90298
258	10			90	0.90298
261	90	10			0.90298
262	10	90			0.90298
348	83	16			0.999991
356	83	16			0.999991
358	83			16	0.999991
359	83		16		0.999991
360	83		16		0.999991
362	83			16	0.999991
446			88	11	0.923564
448	88	11			0.923564
449	88		11		0.923564
450		11		88	0.923564
458			87	12	0.992554
498	85		14		0.993533
568	75		25		0.996473
569	75			25	0.996473
570			75	25	0.996473
573	75		25		0.996473
605		27	72		1.0
606	72			27	1.0
609		72	27		1.0
613	72			27	1.0
614	72		27		1.0
616		27		72	1.0
617	27		72		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain