SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene792

Length: 919 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene792

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene26829	37/42

Source	Descriptions	Term	Type	Identity
AutoFact	60S ribosomal protein L23 n=41 Tax=Embryophyta RepID=RL23_ARATH	-	-	96%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	99%
Blast2go	60s ribosomal protein l23	-	-	99%

Source	GOs	Term	Type	e value	Identity
Blast2go	nucleolus	GO:0005730	Cellular Component	0.0	99%
Blast2go	cytosolic large ribosomal subunit	GO:0022625	Cellular Component	0.0	99%

Source	InterPros	Term	Type	e value	Identity
Sma3	Ribosomal protein L14b/L23e	IPR000218	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 56)

Position	A %	C %	G %	T %	Probability
68	80		20		0.995493
69			80	20	0.995493
70		20	80		0.995493
73			20	80	0.995493
75	80	20			0.995493
76		20	80		0.995493
77			80	20	0.995493
78			80	20	0.995493
82		20	80		0.995493
88	80	20			0.995493
89	80			20	0.995493
90		20		80	0.995493
91	20			80	0.995493
117		75		25	1.0
118	75	25			1.0
120	75			25	1.0
123		25		75	1.0
124	75	25			1.0
127			25	75	1.0
129	75	25			1.0
132	75			25	1.0
137	75	25			1.0
138	25			75	1.0
203		11	88		0.923564
204		11	88		0.923564
205			88	11	0.923564
206	88			11	0.923564
213			88	11	0.923564
214	77	11			0.968132
216	88	11			0.923564
217		88		11	0.923564
218	88	11			0.923564
290			11	88	1.0
292	88	11			1.0
293			11	88	1.0
294	88			11	1.0
295		89	10		1.0
296	93		6		0.999453
297		6		89	0.998304
299	82	3	6	6	0.991673
301		82	13	3	1.0
302	89		10		1.0
303		17	82		1.0
304		6		93	0.999453
305			93	6	0.999453
307		10	6	82	1.0
308	93		6		0.999453
309	82	17			1.0
310			82	17	1.0
311		10	89		1.0
312	10		82	6	1.0
313	92	7			0.999532
315		7		92	0.999532
316	92			7	0.999532
317	92	7			0.999532
591	88			11	0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain