SustainPineDB

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Assembly info
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene757

Length: 218 nt

UniGene Fasta

>uagpf_v2_unigene757
GGAGTAACAGCAAGACCGGAGATGGAGGTGGGAAAATTGAGAGACGAAGATCTTCTGGATCCCAACCCAGACATCCATGCTCTCTTCTGTCATTACAATGAATTATACTTTGGCAACGCTTTAGGCGCATGCACCGTCGATTGGAGTTCCAAGCGCATGACTTTGTGTGCAGGCGTCTGCCATTATATGAAATTGGGTGGTTGTGCTATACGCCTTTC

Ace file of the UniGene uagpf_v2_unigene757

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene14932	3/3

Source	Descriptions	Term	Type	e value	Identity
AutoFact	SprT-like domain containing protein	-	-	3.0e-17	29%
FL-Next	tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).	-	-	0.0	68%
Blast2go	zinc finger rad18 domain-containing protein	-	-	2.98322e-41	63%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: tr_plants

Fln subject: D8RV46

Fln msg: Distance to subject end: 165 aas, your sequence is shorter than subject: 65 - 228

Fln protein: MEVGKLRDEDLLDPNPDIHALFCHYNELYFGNALGACTVDWSSKRMTLCAGVCHYMKLGGCAIRL

Protein Length: 66

Fln nts: GGAGTAACAGCAAGACCGGAG_-_ATGGAGGTGGGAAAATTGAGAGACGAAGATCTTCTGGATCCCAACCCAGACATCCATGCTCTCTTCTGTCATTACAATGAATTATACTTTGGCAACGCTTTAGGCGCATGCACCGTCGATTGGAGTTCCAAGCGCATGACTTTGTGTGCAGGCGTCTGCCATTATATGAAATTGGGTGGTTGTGCTATACGCCTTTC

Fln Alignment:

Contig757___KLRDEDLLDPNPDIHALFCHYNELYFGNALGACTVDWSSKRMTLCAGVCHYMKLGGCAIRL
D8RV46______________EVRHGDLLDPHPDITALFCYYNALYFQGKLGACSVQWSSKRMTLCAGICKYSFCGGCEIRL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain