SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene662

Length: 922 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene662

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene8534	12/12

Source	Descriptions	Term	Type	Identity
AutoFact	C-terminal S-isoprenylcysteine carboxyl O-methyltransferase [Arabidopsis thaliana] dbj\|BAA97485.1\| unnamed protein product [Arabidopsis thaliana] gb\|AAN86190.1\| unknown protein [Arabidopsis thaliana] gb\|AED97198.1\| C-terminal S-isoprenylcysteine carboxyl	-	-	45%
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	50%
Blast2go	protein	-	-	61%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring one-carbon groups, Methyltransferases.	EC:2.1.1.-	-	0.0	61%

Source	KEGGs	Term	Identity
Blast2go	Ubiquinone and other terpenoid-quinone biosynthesis	00130	61%
Blast2go	Tetracycline biosynthesis	00253	61%
Blast2go	Histidine metabolism	00340	61%
Blast2go	Tyrosine metabolism	00350	61%
Blast2go	Phenylalanine metabolism	00360	61%
Blast2go	Tryptophan metabolism	00380	61%
Blast2go	Benzoxazinoid biosynthesis	00402	61%
Blast2go	Selenocompound metabolism	00450	61%
Blast2go	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	61%
Blast2go	Polycyclic aromatic hydrocarbon degradation	00624	61%
Blast2go	Methane metabolism	00680	61%
Blast2go	Porphyrin and chlorophyll metabolism	00860	61%
Blast2go	Carotenoid biosynthesis	00906	61%
Blast2go	Phenylpropanoid biosynthesis	00940	61%
Blast2go	Flavonoid biosynthesis	00941	61%
Blast2go	Anthocyanin biosynthesis	00942	61%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	61%
Blast2go	Isoquinoline alkaloid biosynthesis	00950	61%
Blast2go	Insect hormone biosynthesis	00981	61%
Blast2go	Biosynthesis of type II polyketide products	01057	61%
Blast2go	Biosynthesis of alkaloids derived from shikimate pathway	01063	61%
Blast2go	Metabolic pathways	01100	61%
Blast2go	Biosynthesis of secondary metabolites	01110	61%

Source	GOs	Term	Type	e value	Identity
Blast2go	methylation	GO:0032259	Biological Process	0.0	61%
Blast2go	methyltransferase activity	GO:0008168	Molecular Function	0.0	61%

Source	InterPros	Term	Type	e value	Identity
Sma3	Isoprenylcysteine carboxyl methyltransferase	IPR007269	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: tr_plants

Fln subject: A9SS39

Fln msg:

Fln protein: MAAIAIWAAKHTLGVLLNPYTWMYGSWFFIVWPWPTAVLLGLAALFAGFRKFKGKAGEREQMFILAVSLLWLIIVPPAHFNGYLEGWPVMLFIVYFGFFMINSYVRYTLYGDINPRPDDNQWKTSPSRIVQIAFVASVIGGHLLAAYESPPLSMIPGGWNNVIPSLVLFLAMAVHYNATHYLGKYLDRLVVPRTVVMFGPYRWVRHPIYSSYMLLFAGYCIALRAYVSLFLLILVCFLYYEHRANLEEDMLVDAFGDLYTSYREKVRRKYVPFVY*

Protein Length: 277

Fln nts: CCTCCAAGTGGGCAGCA_-_ATGGCAGCCATTGCCATTTGGGCAGCCAAACACACTCTGGGTGTATTGTTGAATCCGTACACGTGGATGTATGGTAGCTGGTTTTTTATAGTCTGGCCATGGCCAACAGCTGTTCTGTTGGGACTCGCCGCTCTTTTTGCTGGCTTCAGAAAGTTTAAAGGGAAAGCTGGAGAACGGGAACAGATGTTCATTCTAGCAGTTTCGCTTTTATGGCTTATTATAGTTCCTCCGGCTCATTTCAATGGATATTTAGAAGGTTGGCCTGTGATGCTTTTTATTGTATATTTTGGCTTCTTCATGATTAACTCTTACGTCAGATATACTCTCTATGGGGATATAAACCCTCGGCCTGATGACAATCAGTGGAAAACCAGCCCTTCCAGAATTGTTCAAATTGCTTTCGTTGCCTCTGTTATTGGGGGTCATTTGCTGGCTGCATATGAGAGCCCCCCACTATCTATGATTCCAGGTGGATGGAACAATGTTATTCCTTCCCTTGTTCTCTTCTTAGCAATGGCTGTGCACTACAACGCAACACACTACTTGGGAAAATATTTGGACAGACTTGTAGTGCCTAGAACTGTGGTTATGTTTGGTCCCTACCGATGGGTTCGTCATCCAATCTACAGCAGCTATATGCTTTTATTTGCTGGTTACTGCATTGCCCTACGTGCCTATGTCAGCTTATTTTTACTTATTCTGGTATGCTTCCTGTATTATGAACATAGGGCCAACTTGGAAGAAGATATGCTGGTGGACGCTTTTGGGGATCTCTATACAAGTTATAGGGAGAAAGTTCGCCGCAAATACGTTCCTTTTGTTTATTGA___GACATGAAACTCTTCCAGCCAGCCAACAATGATAGTAAAATTGCTTTTGTCATCACCATTCTATTATCTTAGACTTA

Fln Alignment:

Contig662___MYGSWFFIVWPWPTAVXXXXXXXXXXXXXXXXXXXEREQMFILAVSLLWLIIVPPAHFNGYLEGWPVMLFIVYFGFFMINSYVRYTLYGDINPRPDDNQWKTSPSRIVQIAFVASVIGGHLLAAYESPPLSMIPG-GWNNVIPSLVLFLAMAVHYNATHYLGKYLDRLVVPRTVVMFGPYRWVRHPIYSSYMLLFAGYCIALRAYVSLFLLILVCFLYYEHRANLEEDMLVDAFGDLYTSYREKVRRKYVPFVY
A9SS39______________MYASWLGVVWPLPAAVTLGIWSVFAATRQAKSGTKEGEQIFILGGALVWLVLVPLAHAHGFVDGWPMLLFTLYYFFFNISGFVRDRMYGTLSTIPEDKKWRSSPHQAIQIAFVMAIVGGHWAAAFEAPFLAHTWNLAWQSKLAAAFLGLAVVVNWNSIYFLGKYSDRLVNPKTVVMFGPYRWVRHPMYASYMLLCAGYCLALRSYFSLLFLVISCIAYYDQRTKLEEKNLVEEFGTAYTSYREKTKYKFLPWLY

SNPs (tot: 18)

Position	A %	C %	G %	T %	Probability
500		25		75	0.996473
503		25		75	0.996473
504	75		25		0.996473
507	25			75	0.996473
512		75	25		0.996473
513		75	25		0.996473
520	25			75	0.996473
524	25			75	0.996473
581	85	14			0.993533
583	85			14	0.993533
585			14	85	0.993533
588		14		85	0.993533
589	85	14			0.993533
590			85	14	0.993533
593		85	14		0.993533
596	85		14		0.993533
597			85	14	0.993533
598	85	14			0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain