SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene453

Length: 868 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene453

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene8588	5/22
SustainPine v2.0	sp_v2.0_unigene28265	14/22

Source	Descriptions	Term	Type	Identity
AutoFact	uncharacterized protein [Arabidopsis thaliana] emb\|CAB81845.1\| putative protein [Arabidopsis thaliana] gb\|AEE80084.1\| uncharacterized protein [Arabidopsis thaliana]	-	-	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	97%
Blast2go	protein	-	-	68%

Source	GOs	Term	Type	e value	Identity
Blast2go	chloroplast inner membrane	GO:0009706	Cellular Component	0.0	68%

Full-Lengther Next Prediction

SNPs (tot: 31)

Position	A %	C %	G %	T %	Probability
93		11		88	0.923564
94			11	88	0.923564
99		11		88	0.923564
107		11	88		0.923564
109			11	88	0.923564
111		11		88	0.923564
112	11		88		0.923564
268			20	80	0.999996
272		20	80		0.999996
277	80		20		0.999996
278		20		80	0.999996
290		10		90	0.90298
296		10		90	0.90298
297		10	90		0.90298
298	90			10	0.90298
303		90	10		0.90298
308	11		88		0.923564
450	33	66			0.997452
489		10	90		0.90298
490	90		10		0.90298
492		10		90	0.90298
494		90		10	0.90298
495			10	90	0.90298
497		10	90		0.90298
501			10	90	0.90298
502		10		90	0.90298
503	90			10	0.90298
504	90		10		0.90298
508	90	10			0.90298
509	88			11	0.923564
577			18	81	0.999994

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain