SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene215

Length: 347 nt

UniGene Fasta

>uagpf_v2_unigene215
GATGGCCTTGGCCTGTCTCTCCAAGTCTGCACTCTCAACTGGGCAGAACTCCAATCTGGCCCCCTCAAACTTGCTCTTTTGCGTGCACCCAGTGACTTTGCACCTCAGAAAAGCTACGCTTCTTTCCTTTCATTCAATGTTACAGACATAAATAGCACAGTAACAAGGCTTATTTCAATGGGAGCTGAGCTGGATGGGCCTGTCAAGCATGAAGTACATGGTAAGGTTGCAGCTCTACGCATAGACAGCCATATGCTGGGCCTTTATGAACCTGCATGATTGTAAGAGTACATAGCTTTACCTCTGGGCAGTTTTGTCATGGAAACAACTAATAAATCAGAGTTTAT

Ace file of the UniGene uagpf_v2_unigene215

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene13905	10/10

Source	Descriptions	Term	Type	e value	Identity
AutoFact	lactoylglutathione lyase family protein / glyoxalase I family protein [Arabidopsis thaliana] dbj\|BAB11471.1\| unnamed protein product [Arabidopsis thaliana] dbj\|BAC43418.1\| unknown protein [Arabidopsis thaliana] gb\|AAO50472.1\| unknown protein [Arabidopsis	-	-	3.0e-36	61%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	68%
Blast2go	lactoylglutathione lyase family protein	-	-	0.0	83%

Source	ECs	Term	Type	e value	Identity
Blast2go	Oxidoreductases, Acting on single donors with incorporation of molecular oxygen, With incorporation of two atoms of oxygen.	EC:1.13.11.-	-	0.0	83%

Source	KEGGs	Term	Identity
Blast2go	Benzoate degradation	00362	83%
Blast2go	Tryptophan metabolism	00380	83%
Blast2go	Arachidonic acid metabolism	00590	83%
Blast2go	Xylene degradation	00622	83%
Blast2go	Toluene degradation	00623	83%
Blast2go	Polycyclic aromatic hydrocarbon degradation	00624	83%
Blast2go	Naphthalene degradation	00626	83%
Blast2go	Aminobenzoate degradation	00627	83%
Blast2go	Nitrotoluene degradation	00633	83%
Blast2go	Betalain biosynthesis	00965	83%
Blast2go	Metabolic pathways	01100	83%

Source	GOs	Term	Type	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	83%
Blast2go	lyase activity	GO:0016829	Molecular Function	83%
Blast2go	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	GO:0016702	Molecular Function	83%

Source	InterPros	Term	Type	e value	Identity
Sma3	Glyoxalase/fosfomycin resistance/dioxygenase	IPR004360	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: F6HUQ4

Fln msg: your sequence is shorter than subject: 93 - 116

Fln protein: DGLGLSLQVCTLNWAELQSGPLKLALLRAPSDFAPQKSYASFLSFNVTDINSTVTRLISMGAELDGPVKHEVHGKVAALRIDSHMLGLYEPA*

Protein Length: 94

Fln nts: GATGGCCTTGGCCTGTCTCTCCAAGTCTGCACTCTCAACTGGGCAGAACTCCAATCTGGCCCCCTCAAACTTGCTCTTTTGCGTGCACCCAGTGACTTTGCACCTCAGAAAAGCTACGCTTCTTTCCTTTCATTCAATGTTACAGACATAAATAGCACAGTAACAAGGCTTATTTCAATGGGAGCTGAGCTGGATGGGCCTGTCAAGCATGAAGTACATGGTAAGGTTGCAGCTCTACGCATAGACAGCCATATGCTGGGCCTTTATGAACCTGCATGA___TTGTAAGAGTACATAGCTTTACCTCTGGGCAGTTTTGTCATGGAAACAACTAATAAATCAGAGTTTAT

Fln Alignment:

Contig215___DGLGLSLQVCTLNWAELQSGPLKLALLRAPSDFAPQKSYASFLSFNVTDINSTVTRLISMGAELDGPVKHEVHGKVAALR-IDSHMLGLYEPA
F6HUQ4______________EGLDFTINVCTLRWAELQSGPLKLALMQNQSDHDMQKGYSSLLSFTVTDINSTVTKLMALGAELDGPIKYEIHGKVAAMRCIDGHMLGLYEAA

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
18	54			45	1.0
79		27		72	1.0
287	66		33		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain