SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene175

Length: 1395 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene175

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene8999	7/21
SustainPine v2.0	sp_v2.0_unigene17054	3/21
SustainPine v2.0	sp_v2.0_unigene17842	9/21

Source	Descriptions	Term	Type	e value	Identity
AutoFact	mitogen-activated protein kinase 2 [Nicotiana tabacum]	-	-	3.0e-16	37%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	96%
Blast2go	protein	-	-	0.0	67%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	0.0	67%

Source	GOs	Term	Type	Identity
Blast2go	positive regulation of protein phosphorylation	GO:0001934	Biological Process	67%
Blast2go	response to wounding	GO:0009611	Biological Process	67%
Blast2go	ethylene biosynthetic process	GO:0009693	Biological Process	67%
Blast2go	ethylene mediated signaling pathway	GO:0009873	Biological Process	67%
Blast2go	camalexin biosynthetic process	GO:0010120	Biological Process	67%
Blast2go	response to salt stress	GO:0009651	Biological Process	67%
Blast2go	protein autophosphorylation	GO:0046777	Biological Process	67%
Blast2go	positive regulation of transcription, DNA-dependent	GO:0045893	Biological Process	67%
Blast2go	MAP kinase kinase activity	GO:0004708	Molecular Function	67%
Blast2go	protein binding	GO:0005515	Molecular Function	67%
Blast2go	protein kinase activator activity	GO:0030295	Molecular Function	67%
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	67%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5AD68

Fln msg: Distance to subject end: 159 aas, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 176 - 337

Fln protein: VQVDRKARVGLKLPIPAREDAFAKPMPLPLPLPKPPNMNGACKLPCVPLEEVTLEDLQKISTLGCGSSGKVYKVKHAKTGKIYALKIIQEKHELAVRKQIMREMEILRRANSPHIVQCYGIFDRGGEISFVLEYMDGGTLAQVLQAHKKIPEHYLAEVARQVLKGLHYLHQNKIVH

Protein Length: 177

Fln nts: GGCTCAAAGCGAATTGATTACGTTCGTTTAGCTGGCATTTCCCTGCCCTCATCTCATCTCGGTTTCCCATTTTCCCTTTTGGCATAGAAAACAGAACACCCAGTTCCATATTTGGTTCCGTTGTAACGAGTTTCTATTTTGTGGCTGGATCCTTGGAGCTCTGGCCTGGTTACTGACAGGCAGATTAGAGATTTCTGGCAGATATTTGTAGCCAGTTATTCCAAGGTTTGTGGTGTTCAATCTCTGTTGGATCACTAGGGTTCTGGCAGTTGGGTGGTTTTGATAAAATTGTGGCTCGACTGTGATAGGCAAAGGCCAGTAGCAGGCATTTCCGGCAGACTGAAGGAGTTTCTACTCTCAGGTGGTTAAAGGCAAGTTTTTATTTTTGTTTGTTTTCTGTGTGATTTCATCTTTGAGGAATTAGTGAATGTGGTTTTCGTTGATGCATCCAATTGGCGTGGACGATATAGTTTCCTGTGAGAAAATTGTAACTGCGAATTTGCTGGTGTGGGCTGTAGATAATTAGAGAATATTGAGAAATACAGTTGTGTTCGTCAAATGGTAACTCAACCTGGTTTGTGGGTTATGGAAAATTGAGTTTTGTTGTGAAGAAATTGTTCACAAATTGGTATTGATAAATGGGGTTTCAGAATAGTTGGGAAGATGGTATATTGACGGAAGAGATTAGCTAGGGGGTTTCTGTTAACTTTTGGAAGGGTTTGGTATCAGGGTTTTTGTTGTTGTGAGGAGATTCTTGGAGAGATTTCTGAAATTGGTATTGGTTCTCCTTGTCTGAAATAGTGTTGTGAAGAGGAAGAGGGTATATAGAGGCAAAGGCAAGCTTTCTGTTTCAGTGGGAAG_-_ATGAGTTCAAGTGGATAGAAAAGCGAGGGTGGGTTTGAAGCTGCCAATCCCAGCTCGGGAAGACGCATTTGCTAAGCCAATGCCATTGCCGCTTCCACTGCCGAAGCCCCCTAACATGAATGGTGCCTGCAAGTTGCCCTGTGTTCCTCTTGAAGAAGTTACACTGGAAGATCTCCAGAAGATTTCAACTTTGGGGTGTGGGAGCAGTGGTAAGGTCTACAAGGTTAAGCATGCCAAGACTGGGAAAATTTATGCCCTCAAAATCATTCAGGAAAAGCACGAGCTTGCTGTCCGAAAGCAAATAATGAGGGAAATGGAGATTCTCCGAAGGGCGAATTCTCCACACATCGTGCAGTGTTATGGTATATTCGATCGAGGAGGAGAGATCTCTTTTGTGCTGGAGTACATGGACGGTGGAACCCTTGCGCAGGTTCTTCAAGCCCACAAGAAAATCCCAGAACACTATTTGGCTGAGGTTGCCAGACAGGTGCTGAAGGGCTTGCATTACCTGCACCAGAACAAAATTGTTCACCG

Fln Alignment:

Contig175___DRKARVGLKLPIPAREDAFAXXXXXXXXXXXXXXXXGACKLPCVPLEEVTLEDLQKISTLGCGSSGKVYKVKHAKTGKIYALKIIQEKHELAVRKQIMREMEILRRANSPHIVQCYGIFDRGGEISFVLEYMDGGTLAQVLQAHKKIPEHYLAEVARQVLKGLHYLHQNKIVH
D5AD68______________ERKAKVGLKLPIPVREDAFSKPMPLPLPLPKPPNMNGACKLPCVPLEEVTLEDLQKISTLGCGSSGKVYKVKHVKTGKIYALKIIQEKHELAVRKQIMREMEILRRANSPHIVQCYGIFDRGGEISFVLEYMDGGTLAQVLQAHKKIPEHYLAEVARQVLKGLLYLHQNKIVH

SNPs (tot: 89)

Position	A %	C %	G %	T %	Probability
76		75		25	0.996473
84	66		33		1.0
86	66	33			1.0
88	66			33	1.0
89	66		33		1.0
91	66	33			1.0
93	66			33	1.0
94			66	33	1.0
95	66		33		1.0
96	66		33		1.0
98	66			33	1.0
99		66	33		1.0
100		66		33	1.0
104		33		66	1.0
107	33	66			1.0
113		16		83	0.994512
119		87	12		0.992554
122		12		87	0.992554
126	87	12			0.992554
128			87	12	0.992554
129	87			12	0.992554
131			12	87	0.992554
132		12		87	0.992554
134		87	12		0.992554
137		12		87	0.992554
139		12		87	0.992554
140	12			87	0.992554
166		88	11		0.923564
168		11	88		0.923564
171			11	88	0.923564
176	88		11		0.923564
178	88			11	0.923564
180			88	11	0.923564
184	88	11			0.923564
186		11		88	0.923564
214	90	10			0.90298
217		10		90	0.90298
218	90		10		0.90298
220	10			90	0.90298
223	90			10	0.90298
224	90			10	0.90298
229		10		90	0.90298
230	10		90		0.90298
231		10		90	0.90298
232			90	10	0.90298
233		10	90		0.90298
234	10			90	0.90298
299	90	10			0.90298
311	10		90		0.90298
361		11	88		0.923564
364		11	88		0.923564
367	11			88	0.923564
369	87	12			0.992554
370	85			14	0.993533
371	83			16	0.994512
376	83			16	0.994512
380	20			80	0.995493
381		20		80	0.995493
383		20		80	0.995493
546	66		33		0.997452
822		20	80		0.995493
826	80		20		0.995493
830		20		80	0.995493
831	80	20			0.995493
832			80	20	0.995493
833	80			20	0.995493
839	80			20	0.995493
841			80	20	0.995493
844	80	20			0.995493
845			80	20	0.995493
877	62	37			1.0
878			75	25	1.0
880		12	87		0.992554
882	62	25		12	1.0
883			12	87	0.992554
885		12	87		0.992554
886	62	12		25	1.0
887	62	25		12	1.0
888	87			12	0.992554
889	62	25	12		1.0
890			75	25	1.0
892	25		75		1.0
893	87			12	0.992554
894		12	87		0.992554
895	12		87		0.992554
896		12	87		0.992554
899		12	87		0.992554
900	12		87		0.992554
1076			87	12	0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain