SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene24

Length: 822 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene24

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene60983	8/9

Source	Descriptions	Term	Type	e value	Identity
AutoFact	plastid division regulator MinE [Glycine max]	-	-	2.8026e-45	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	plastid division regulator	-	-	0.0	74%

Source	GOs	Term	Type	Identity
Blast2go	chloroplast fission	GO:0010020	Biological Process	74%
Blast2go	identical protein binding	GO:0042802	Molecular Function	74%
Blast2go	ATPase binding	GO:0051117	Molecular Function	74%
Blast2go	chloroplast inner membrane	GO:0009706	Cellular Component	74%

Source	InterPros	Term	Type	e value	Identity
Sma3	Septum formation topological specificity factor MinE	IPR005527	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 28)

Position	A %	C %	G %	T %	Probability
390		28		71	1.0
391	71	28			1.0
396			85	14	0.993533
398		28	71		1.0
402	71			28	1.0
404	28			71	1.0
461	87			12	0.992554
465	87			12	0.992554
468		12		87	0.992554
518	80	20			0.999996
522	90		10		0.90298
523		10		90	0.90298
524		90	10		0.90298
525	90			10	0.90298
526		10	90		0.90298
527		10	90		0.90298
528	80			20	0.999996
529			90	10	0.90298
530			10	90	0.90298
531	90		10		0.90298
533	80			20	0.999996
534		10	90		0.90298
535	10			90	0.90298
536		10	90		0.90298
538	90	10			0.90298
539			90	10	0.90298
540		10	90		0.90298
541	10	90			0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain