SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene976

Length: 863 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene976

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene9945	16/16

Source	Descriptions	Term	Type	Identity
AutoFact	CBS domain-containing protein [Arabidopsis thaliana] gb\|AED96402.1\| CBS domain-containing protein [Arabidopsis thaliana]	-	-	44%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	protein	-	-	62%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to wounding	GO:0009611	Biological Process	0.0	62%

Source	InterPros	Term	Type	e value	Identity
Sma3	Cystathionine beta-synthase, core	IPR000644	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 24)

Position	A %	C %	G %	T %	Probability
86		37	12	50	1.0
87			37	62	1.0
88			12	87	0.992554
89	62	37			1.0
90		62	37		1.0
92	50		50		1.0
93	87		12		0.992554
95		87		12	0.992554
96	50		12	25	1.0
97	50			50	1.0
98	50	12	25	12	1.0
99	12		37	50	1.0
100		87	12		0.992554
102		75	25		1.0
103	12			87	0.992554
104		25	75		1.0
109	37			62	1.0
110		12		87	0.992554
112		12		87	0.992554
113	12			87	0.992554
494		40	60		1.0
499		80		20	0.995493
500		20		80	0.995493
680			50	50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain