SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene668

Length: 829 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene668

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2625	13/15
SustainPine v2.0	sp_v2.0_unigene76340	2/15

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	43%
Blast2go	uncharacterized protein loc100272339	-	-	1.60063e-19	65%

Full-Lengther Next Prediction

SNPs (tot: 41)

Position	A %	C %	G %	T %	Probability
395	66		33		0.997452
397		33		66	0.997452
401	33	66			0.997452
402		33		66	0.997452
405	66			33	0.997452
406		66	33		0.997452
407	66		33		0.997452
408	66	33			0.997452
409	66			33	0.997452
411			66	33	0.997452
415	66			33	0.997452
416		33		66	0.997452
417	83	16			0.994512
418	16		50		1.0
420		16		83	0.994512
424	16			83	0.994512
428	83			16	0.994512
430		83	16		0.994512
431		83	16		0.994512
432	83	16			0.994512
437		16	83		0.994512
438	16			83	0.994512
439		16	83		0.994512
491		20	80		0.999996
492	10		90		0.90298
494	80	20			0.999996
495	80		20		0.999996
497	90		10		0.90298
498	90	10			0.90298
500		10		90	0.90298
501		10	90		0.90298
502			90	10	0.90298
505			90	10	0.90298
508	10			90	0.90298
509		10	30	60	1.0
510			60	40	1.0
511		40		60	1.0
512	40	60			1.0
513	60	20			0.999999
517		10		90	0.90298
519		10		90	0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain