SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene633

Length: 1451 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene633

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene7227	23/23

Source	Descriptions	Term	Type	Identity
AutoFact	CBL-interacting protein kinase 3 n=8 Tax=rosids RepID=A0MNJ1_POPTR	-	-	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	57%
Blast2go	cbl-interacting protein kinase	-	-	73%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	0.0	73%

Source	GOs	Term	Type	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	73%
Blast2go	signal transduction	GO:0007165	Biological Process	73%
Blast2go	ATP binding	GO:0005524	Molecular Function	73%
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	73%
Blast2go	mitochondrion	GO:0005739	Cellular Component	73%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Pentatricopeptide repeat	IPR002885	-	-
Sma3	NAF domain	IPR004041	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	NAF/FISL domain	IPR018451	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LQ83

Fln msg: your sequence is shorter than subject: 314 - 387

Fln protein: RGVYHRDLKPENLLLDAKGNVKISDFGLSALPEQFRADGLLHTTCGSPSYVAPEVIANKGYDGATADVWSCGVILFLLLTGWLPFEDENLAALYQKICKSDFQCPKWLSAGARKLLKRILDPNPKTRITIGEIMKDEWFKQGYSPAKVVEEDTSFDDVAVAFTKSQEHMVREETGPVLMNAFQLIAMSGSLDLSGLFEEEDAAERKTRFTSMLPAQEIIHKIQETVETMGFQVKSKNSKLKLVHADPKSKGRNGHLCVTTEVFKVTACLHMVEIRKYSGNITQYRELCRKLSSDLGFQPEVWRESGIPGCKVV*

Protein Length: 315

Fln nts: CAGGGGTGTTTATCACAGAGATTTGAAGCCGGAGAATCTTCTGCTGGATGCAAAAGGAAATGTGAAGATATCTGACTTCGGCCTCAGCGCGCTTCCAGAGCAATTTAGGGCAGACGGGTTGTTGCATACCACTTGTGGGAGCCCCAGTTACGTGGCACCCGAGGTGATTGCTAACAAAGGATACGATGGTGCTACTGCTGATGTTTGGTCTTGTGGGGTCATTCTATTTCTTCTTTTGACTGGCTGGCTGCCATTCGAAGACGAAAATCTTGCAGCTCTGTATCAGAAGATCTGCAAAAGCGATTTCCAGTGTCCAAAATGGCTATCTGCAGGCGCTCGCAAATTGCTCAAACGAATACTTGATCCCAATCCGAAGACACGCATAACTATAGGTGAAATAATGAAAGATGAGTGGTTTAAGCAAGGCTATTCCCCAGCGAAAGTTGTGGAGGAGGACACTTCCTTCGATGATGTGGCTGTTGCATTTACAAAGTCGCAGGAACATATGGTGAGGGAGGAAACGGGGCCGGTTCTCATGAACGCTTTTCAGTTAATAGCAATGTCAGGGAGCCTGGACCTCTCCGGTTTATTTGAAGAAGAGGATGCCGCCGAAAGGAAGACGAGATTCACATCCATGTTACCGGCCCAGGAGATTATACACAAAATCCAAGAAACGGTCGAAACCATGGGGTTTCAGGTCAAGAGCAAGAATAGCAAGCTAAAATTGGTACATGCGGATCCTAAATCGAAAGGGAGAAATGGACATCTTTGCGTGACAACGGAGGTGTTCAAGGTCACAGCCTGTTTGCACATGGTAGAGATCAGAAAATACTCCGGAAACATAACACAGTACAGAGAGTTGTGCAGAAAGTTATCAAGTGATCTTGGCTTCCAACCTGAAGTGTGGAGGGAGAGTGGCATTCCTGGTTGTAAAGTTGTGTAA___GAATTAAAGTGTGATGAAGATAAAAAAATGGTGTTCGAACTGGATTCCGAGTGAGGTTTTCATGGTGAAACACTGGAATTAGTTTTTAATATTCTTACTTTTATACATCTGAGATGGCGTATGAAACGACCTATGATCTTCCACAAAGAGGAAGCAACTACTCACTTAGCATTAGAGCATCTATACGGGCAGTGAAAATTTATTATGGTTTTGTGGAAGCAACTACTTAGCATTGAGCATCTATTTTGGGAGTAGAAATTTATTGTGGTGGTGTGGTACTTGGTGAAGTGCACAGTGGTCTTCCATATCATCGACAGGAGTGCAAAACGAGCTGCAAGAACCCAACATTGCTGACAAATCCTTGTATTATCCTCGTTCAAGTCATTGAGGTGGGATTTTTGGTTCACAATGATGAGCCTTATGGACTTTATCGTCCAATTTGTAACATTTTTACAGTCATGTAACATGTTATCACAATAAATGCTTAATCTTCATAATGTAAGAGGGT

Fln Alignment:

Contig633___RGVYHRDLKPENLLLDAKGNVKISDFGLSALPEQFRADGLLHTTCGSPSYVAPEVIANKGYDGATADVWSCGVILFLLLTGWLPFEDENLAALYQKICKSDFQCPKWLSAGARKLLKRILDPNPKTRITIGEIMKDEWFKQGYSPAKV-VEEDTSFDDVAVAFTKSQEHMVRE--ETGPVLMNAFQLIAMSGSLDLSGLFE-EEDAAERKTRFTSMLPAQEIIHKIQETVETMGFQVKSKNSKLKLVHADPKSKGRNGHLCVTTEVFKVTACLHMVEIRKYSGNITQYRELCRKLSSDLGFQPEVWRESGI
B8LQ83______________RGVYHRDLKPENLLLDTYGNLKVSDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVINDKGYDGATADLWSCGVILFVLMAGYLPFDDSNLMTLYKKIYKADFTCPSWFSSSAKKLITRILDPNPKTRITIPEILDNEWFKKGYKPPKFNEEEDVNLDDIDAVFNDSEEHLVTEKKETEPELMNAFELISMSQGLNLGNLFEMDMGMVKRETRFASKRPANEIVSKIEEAAKPLGFNVQKRNYKMKM---QGSKTGRKGHLNVATEVFEVAPSLYMVEVRKAGGDTLEFHKFYKNLSA--GLKDVVWKAEDI

SNPs (tot: 42)

Position	A %	C %	G %	T %	Probability
561		25		75	0.996473
567			75	25	0.996473
570		25	75		0.996473
572		75		25	0.996473
576	75	25			0.996473
577		75		25	0.996473
578		75	25		0.996473
581	25			75	0.996473
859	77	22			0.999999
862		22		77	0.999999
866	22	77			0.999999
867	77	22			0.999999
868		22	77		0.999999
869	77			22	0.999999
870	77			22	0.999999
871	77		22		0.999999
873		22		77	0.999999
875	77		22		0.999999
880	77			22	0.999999
881		22	77		0.999999
882	22			77	0.999999
884	77			11	0.968132
889		11	88		0.923564
955		14		85	0.993533
958		14	85		0.993533
959	85		14		0.993533
963	85	14			0.993533
964		14	85		0.993533
965	85			14	0.993533
967	85		14		0.993533
968	85		14		0.993533
969	85	14			0.993533
970	85			14	0.993533
971	85		14		0.993533
972	85			14	0.993533
973	85	14			0.993533
974	14			85	0.993533
1017	84			15	0.999986
1022	84	15			0.999986
1124	72		18		0.999994
1127	18			81	0.999994
1130	81	18			0.999994

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain