SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene615

Length: 903 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene615

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene25452	39/40

Source	Descriptions	Term	Type	Identity
AutoFact	mortality factor 4-like protein 1 [Arabidopsis thaliana] gb\|AAK59778.1\| AT4g37280/C7A10_80 [Arabidopsis thaliana] gb\|AAM98302.1\| At4g37280/C7A10_80 [Arabidopsis thaliana] gb\|AEE86776.1\| mortality factor 4-like protein 1 [Arabidopsis thaliana]	-	-	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	96%
Blast2go	mortality factor 4-like protein 1	-	-	76%

Source	InterPros	Term	Type	e value	Identity
Sma3	Chromo domain/shadow	IPR000953	-	0.0	-
Sma3	MRG	IPR008676	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 22)

Position	A %	C %	G %	T %	Probability
381	90			10	0.90298
383	90		10		0.90298
384	90			10	0.90298
386	10		90		0.90298
388		10		90	0.90298
392		90	10		0.90298
398	10		90		0.90298
399	90	10			0.90298
401		10	90		0.90298
402	10	90			0.90298
482		18	81		0.999994
484			81	18	0.999994
495		81	18		0.999994
496		81	18		0.999994
497		18		81	0.999994
503	11			77	0.968132
504		11		77	0.968132
505	11			88	0.923564
506		22		77	0.999999
507	11			77	0.968132
508		11	88		0.923564
509	11			88	0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain