SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene597

Length: 788 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene597

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2977	15/17

Source	Descriptions	Term	Type	Identity
AutoFact	PLC-like phosphodiesterase-like protein [Arabidopsis thaliana] dbj\|BAB02455.1\| MAP3K protein kinase-like protein [Arabidopsis thaliana] gb\|AEE76222.1\| PLC-like phosphodiesterase-like protein [Arabidopsis thaliana]	-	-	65%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	46%
Blast2go	pi-plc x domain-containing protein at5g67130-like	-	-	81%

Source	GOs	Term	Type	Identity
Blast2go	lipid metabolic process	GO:0006629	Biological Process	81%
Blast2go	phospholipase C activity	GO:0004629	Molecular Function	81%
Blast2go	endomembrane system	GO:0012505	Cellular Component	81%
Blast2go	intracellular signal transduction	GO:0035556	Biological Process	81%

Source	InterPros	Term	Type	Identity
Sma3	Protease inhibitor I4, serpin	IPR000215	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Phospholipase C, phosphatidylinositol-specific , X domain	IPR000909	-	-
Sma3		IPR004141	-	-
Sma3	Epidermal growth factor-like	IPR006210	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Six-bladed beta-propeller, TolB-like	IPR011042	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain	IPR017946	-	-
Sma3	Strictosidine synthase, conserved region	IPR018119	-	-
Sma3	Carbohydrate kinase, FGGY, conserved site	IPR018483	-	-

Full-Lengther Next Prediction

SNPs (tot: 24)

Position	A %	C %	G %	T %	Probability
328		88	11		0.923564
339	88	11			0.923564
342		11		88	0.923564
343	88			11	0.923564
345	88			11	0.923564
348		11		88	0.923564
410			16	83	0.994512
412		16	83		0.994512
414			83	16	0.994512
419	83			16	0.994512
422		16	83		0.994512
424		16	83		0.994512
425		83		16	0.994512
427	16			83	0.994512
462	88			11	0.923564
465			88	11	0.923564
468	88	11			0.923564
470			88	11	0.923564
472	88		11		0.923564
473	88		11		0.923564
477	88			11	0.923564
480		11	88		0.923564
481	88			11	0.923564
482	88	11			0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain