SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene532

Length: 751 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene532

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene4447	11/11

Source	Descriptions	Term	Type	e value	Identity
AutoFact	pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase	-	-	1.0e-05	18%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	37%
Blast2go	gdl64_arath ame: full=gdsl esterase lipase at4g16230 ame: full=extracellular lipase at4g16230 flags: precursor	-	-	0.0	56%

Full-Lengther Next Prediction

SNPs (tot: 39)

Position	A %	C %	G %	T %	Probability
106	80	20			0.995493
109		20	80		0.995493
112			20	80	0.995493
113	20			80	0.995493
116	80			20	0.995493
117	80			20	0.995493
119	80		20		0.995493
122		80	20		0.995493
124		20		80	0.995493
129	20		80		0.995493
212		16	83		0.994512
215		16	83		0.994512
216		83	16		0.994512
217	83			16	0.994512
218		83	16		0.994512
225			16	83	0.994512
227	83			16	0.994512
230		16	83		0.994512
405		25		75	0.996473
432		33		66	1.0
436		66	33		1.0
438			50	50	1.0
439	33		66		1.0
441		40		60	1.0
442			60	40	1.0
446	60	40			1.0
447			50	50	1.0
450	50			50	1.0
451		50	50		1.0
452	50			50	1.0
453		50	50		1.0
458		12		87	0.992554
459			12	87	0.992554
468			12	87	0.992554
471	87		12		0.992554
472	87			12	0.992554
530		14		85	0.993533
531		85		14	0.993533
575	16	83			0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain