SustainPineDB

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Assembly info
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Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene374

Length: 245 nt

UniGene Fasta

>uagpf_v2_unigene374
GTGACCTTGGCTGTCACTCATTTCAGGAAGTCACGAACAGATACGCACAAGAAAAACAGGCAGTGGATGAGCTGCTGAAACTACGAGATAATATTCAATCATCATTTCACTGCAAGTACTGTAGCTAAAGACTACTAGCAGCAGTAACACAAGCTAAGCCCACAGGTGAAGATTCCAAGATTGAAAGTACCAAAAGAGATAGCCTATACGGATGGGAAGGATAAATCTAAATAGAAAGAAGTGGT

Ace file of the UniGene uagpf_v2_unigene374

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene4679	2/3

Source	Descriptions	Term	Type	Identity
AutoFact	chaperone protein dnaJ 15 [Arabidopsis thaliana] sp\|Q9ZSY2.1\|DNJ15_ARATH RecName: Full=Chaperone protein dnaJ 15; Short=AtDjB15; Short=AtJ15; AltName: Full=Protein ALTERED RESPONSE TO GRAVITY; Short=AtARG1 gb\|AAF26045.1\|AC015986_8 ARG1 protein (Altered Re	-	-	73%
FL-Next	sp=Chaperone protein dnaJ 15; Arabidopsis thaliana (Mouse-ear cress).	-	-	55%
Blast2go	protein	-	-	85%

Source	GOs	Term	Type	Identity
Blast2go	protein folding	GO:0006457	Biological Process	85%
Blast2go	phototropism	GO:0009638	Biological Process	85%
Blast2go	positive gravitropism	GO:0009958	Biological Process	85%
Blast2go	unfolded protein binding	GO:0051082	Molecular Function	85%
Blast2go	cytoskeletal protein binding	GO:0008092	Molecular Function	85%
Blast2go	catalytic activity	GO:0003824	Molecular Function	85%
Blast2go	heat shock protein binding	GO:0031072	Molecular Function	85%
Blast2go	membrane	GO:0016020	Cellular Component	85%

Source	InterPros	Term	Type	Identity
Sma3	Heat shock protein DnaJ, N-terminal	IPR001623	-	-
Sma3	Heat shock protein DnaJ, conserved site	IPR018253	-	-
Sma3		IPR015609	-	-
Sma3	Heat shock protein DnaJ	IPR003095	-	-

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: sp_plants

Fln subject: Q9ZSY2

Fln msg: query STOP codon is far from subject stop. Distance to subject end: 21 aas, your sequence is shorter than subject: 74 - 410

Fln protein: DLGCHSFQEVTNRYAQEKQAVDELLKLRDNIQSSFHCKYCS*RLLAAVTQAKPTGEDSKIESTKRDSLYGWEG*

Protein Length: 75

Fln nts: GTGACCTTGGCTGTCACTCATTTCAGGAAGTCACGAACAGATACGCACAAGAAAAACAGGCAGTGGATGAGCTGCTGAAACTACGAGATAATATTCAATCATCATTTCACTGCAAGTACTGTAGCTAAAGACTACTAGCAGCAGTAACACAAGCTAAGCCCACAGGTGAAGATTCCAAGATTGAAAGTACCAAAAGAGATAGCCTATACGGATGGGAAGGATAA___ATCTAAATAGAAAGAAGTGGT

Fln Alignment:

Contig374___FQEVTNRYAQEKQAVDELLKLRDNIQSSFH-CKYCS*RLLAAVTQAKPTGEDSK
Q9ZSY2______________FQEVTNRYTQEKQTVDELLKQRDTIHSTFSVVKTPSGNNLSNGSSSKAQGDESK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain