SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene26114

Length: 229 nt

UniGene Fasta

>biog3_v1.0_unigene26114
AATGTATGTTTCAACTCGAGTTATGGGAACATATGGTTATGCTGCTCCAGAATATGTAATGACTGGACACTTGACATCTAAGAGCGATGTCTACAGTTTTGGTGTTGTGTTACTTGAATTGCTAACTGGTCGAAGATCTATGGATAAAAACCGGCCAAGTGGGGAACATAATCTGGTGGCATGGGCTCGGCCTTATCTTATGGACAAAAGAAGCTGTATCGTCTTGTGG

Ace file of the UniGene biog3_v1.0_unigene26114

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene795	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	Serine/threonine protein kinase-like protein n=1 Tax=Glycine max RepID=C6ZRY6_SOYBN	-	-	78%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	98%
Blast2go	probable receptor-like protein kinase at5g15080-like	-	-	86%

Source	ECs	Term	Type	e value	Identity
Blast2go	Mitogen-activated protein kinase kinase kinase.	EC:2.7.11.25	-	0.0	86%

Source	GOs	Term	Type	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	86%
Blast2go	ATP binding	GO:0005524	Molecular Function	86%
Blast2go	MAP kinase kinase kinase activity	GO:0004709	Molecular Function	86%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	NB-ARC	IPR002182	-	-
Sma3	Glycosyl transferase, family 8	IPR002495	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NUW8

Fln msg: Distance to subject end: 106 aas, your sequence is shorter than subject: 76 - 465

Fln protein: MYVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLELLTGRRSMDKNRPSGEHNLVAWARPYLMDKRSCIVLW

Protein Length: 77

Fln nts: AATGTATGTTTCAACTCGAGTTATGGGAACATATGGTTATGCTGCTCCAGAATATGTAATGACTGGACACTTGACATCTAAGAGCGATGTCTACAGTTTTGGTGTTGTGTTACTTGAATTGCTAACTGGTCGAAGATCTATGGATAAAAACCGGCCAAGTGGGGAACATAATCTGGTGGCATGGGCTCGGCCTTATCTTATGGACAAAAGAAGCTGTATCGTCTTGTGG

Fln Alignment:

biogeco3_mira_rep_c29943___YVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLELLTGRRSMDKNRPSGEHNLVAWARPYLMDKR
A9NUW8__________________HVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLELLTGRRSMDKNRPSGEHNLVAWARPYLMDKR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain