SustainPineDB

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Assembly info
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Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene25511

Length: 221 nt

UniGene Fasta

>biog3_v1.0_unigene25511
AATGTTATTTTTGTTGGAAAGGAAGAGAATGATACAGAAGTATTAATGGATGCTTTACAAGGGTGTTGTTCCTGCCCTTGCCATGCTAATGGAAGTGACTGCTGTTCTTGTGTCCAAGAAGATCATGTATCTGTACCACAATTACTATCGAAAATAAAGGGTCCTTGGGCTTTAATTTATTGGCAGGCAAAGTCAAAAATTTTGTGGTTTGGAAGAGATGC

Ace file of the UniGene biog3_v1.0_unigene25511

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene31108	1/2
SustainPine v2.0	sp_v2.0_unigene65025	1/2

Source	Descriptions	Term	Type	Identity
AutoFact	asparagine synthetase domain-containing protein 1 [Rattus norvegicus] gb\|EDL99121.1\| similar to HCV NS3-transactivated protein 1 (predicted), isoform CRA_b [Rattus norvegicus]	-	-	40%
FL-Next	tr=Asparagine synthase family protein, expressed; Oryza sativa subsp. japonica (Rice).	-	-	55%
Blast2go	asparagine synthetase domain-containing protein 1-like	-	-	74%

Source	InterPros	Term	Type	Identity
Sma3	Asparagine synthase	IPR001962	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Rossmann-like alpha/beta/alpha sandwich fold	IPR014729	-	-
Sma3	Glutamine amidotransferase, type II	IPR017932	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: Q2QN88

Fln msg: Distance to subject end: 459 aas, your sequence is shorter than subject: 73 - 669

Fln protein: NVIFVGKEENDTEVLMDALQGCCSCPCHANGSDCCSCVQEDHVSVPQLLSKIKGPWALIYWQAKSKILWFGRD

Protein Length: 74

Fln nts: AATGTTATTTTTGTTGGAAAGGAAGAGAATGATACAGAAGTATTAATGGATGCTTTACAAGGGTGTTGTTCCTGCCCTTGCCATGCTAATGGAAGTGACTGCTGTTCTTGTGTCCAAGAAGATCATGTATCTGTACCACAATTACTATCGAAAATAAAGGGTCCTTGGGCTTTAATTTATTGGCAGGCAAAGTCAAAAATTTTGTGGTTTGGAAGAGATGC

Fln Alignment:

biogeco3_mira_c27543___IFVGKEENDTEVLMDALQGCCSCPCHANGSD-CCSCVQEDHVSVPQLLSKIKGPWALIYWQAKSKILWFGRD
Q2QN88__________________VHVADDQNDTQSLLSSLESCCSCECHALVRDEACLCCGSVGKSVPQILSTIKGPWALIYWQKDSKTMWFGRD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain