SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene24747

Length: 626 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene24747 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene30125	6/6

Source	Descriptions	Term	Type	Identity
AutoFact	Acetolactate synthase n=1 Tax=Picea sitchensis RepID=B8LK99_PICSI	-	-	87%
FL-Next	sp=Acetolactate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	69%
Blast2go	acetolactate synthase	-	-	86%

Source	ECs	Term	Type	e value	Identity
Blast2go	Acetolactate synthase.	EC:2.2.1.6	-	0.0	86%

Source	KEGGs	Term	Identity
Blast2go	Valine, leucine and isoleucine biosynthesis	00290	86%
Blast2go	Butanoate metabolism	00650	86%
Blast2go	C5-Branched dibasic acid metabolism	00660	86%
Blast2go	Pantothenate and CoA biosynthesis	00770	86%
Blast2go	Biosynthesis of alkaloids derived from histidine and purine	01065	86%
Blast2go	Metabolic pathways	01100	86%
Blast2go	Biosynthesis of secondary metabolites	01110	86%

Source	GOs	Term	Type	e value	Identity
Blast2go	acetolactate synthase activity	GO:0003984	Molecular Function	0.0	86%
Blast2go	chloroplast	GO:0009507	Cellular Component	0.0	86%

Source	InterPros	Term	Type	Identity
Sma3	TPP-binding enzyme, conserved site	IPR000399	-	-
Sma3	Chalcone/stilbene synthase, N-terminal	IPR001099	-	-
Sma3	Thiamine pyrophosphate enzyme, C-terminal TPP-binding	IPR011766	-	-
Sma3	Thiamine pyrophosphate enzyme, central domain	IPR012000	-	-
Sma3	Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain	IPR012001	-	-
Sma3	Chalcone/stilbene synthase, C-terminal	IPR012328	-	-
Sma3	Acetolactate synthase, large subunit, biosynthetic	IPR012846	-	-
Sma3	Thiolase-like, subgroup	IPR016038	-	-

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
465			33	66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain