SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene24307

Length: 239 nt

UniGene Fasta

>biog3_v1.0_unigene24307
AATGTTCTGACTGTTGTGGAACTGCTGCAGCAACTTCAGGTTCTATGGATGTTCCTCTGCCATTGGAAAAACTTTCTCGTCAGCTGAATACAAAATGCACAACAGATCCTTTGGAACAAAAACGAATGCAAGTGGTTCTTCTATTACCAGGCAGTTTCAATCCACCAACTTATATGCACTTGCGCATGTTTGAACTGGCCAGGGATCAATTGCTATCAGATGGATATGTGGTTCTTGGG

Ace file of the UniGene biog3_v1.0_unigene24307

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene39655	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	nicotinamide-nucleotide adenylyltransferase-like [Oryza sativa Japonica Group]	-	-	4.0e-08	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Blast2go	nicotinamide mononucleotide adenylyltransferase	-	-	9.97111e-21	78%

Source	ECs	Term	Type	e value	Identity
Blast2go	Nicotinate-nucleotide adenylyltransferase.	EC:2.7.7.18	-	9.97111e-21	78%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Nicotinate and nicotinamide metabolism	00760		9.97111e-21	78%
Blast2go	Metabolic pathways	01100		9.97111e-21	78%
Blast2go	Nicotinamide-nucleotide adenylyltransferase.	EC:2.7.7.1	-	9.97111e-21	78%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Nicotinate and nicotinamide metabolism	00760		9.97111e-21	78%
Blast2go	Metabolic pathways	01100		9.97111e-21	78%

Source	GOs	Term	Type	e value	Identity
Blast2go	NAD biosynthetic process	GO:0009435	Biological Process	9.97111e-21	78%
Blast2go	pollen tube growth	GO:0009860	Biological Process	9.97111e-21	78%
Blast2go	pollen development	GO:0009555	Biological Process	9.97111e-21	78%
Blast2go	nicotinate-nucleotide adenylyltransferase activity	GO:0004515	Molecular Function	9.97111e-21	78%
Blast2go	nicotinamide-nucleotide adenylyltransferase activity	GO:0000309	Molecular Function	9.97111e-21	78%

Source	InterPros	Term	Type	Identity
Sma3	Cytidylyltransferase	IPR004820	-	-
Sma3	Probable nicotinate-nucleotide adenylyltransferase	IPR005248	-	-
Sma3	Rossmann-like alpha/beta/alpha sandwich fold	IPR014729	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5A8W4

Fln msg: Distance to subject end: 204 aas, your sequence is shorter than subject: 79 - 478

Fln protein: CSDCCGTAAATSGSMDVPLPLEKLSRQLNTKCTTDPLEQKRMQVVLLLPGSFNPPTYMHLRMFELARDQLLSDGYVVLG

Protein Length: 80

Fln nts: AATGTTCTGACTGTTGTGGAACTGCTGCAGCAACTTCAGGTTCTATGGATGTTCCTCTGCCATTGGAAAAACTTTCTCGTCAGCTGAATACAAAATGCACAACAGATCCTTTGGAACAAAAACGAATGCAAGTGGTTCTTCTATTACCAGGCAGTTTCAATCCACCAACTTATATGCACTTGCGCATGTTTGAACTGGCCAGGGATCAATTGCTATCAGATGGATATGTGGTTCTTGGG

Fln Alignment:

biogeco3_mira_c23898___SDCCGTAAATSGSMDVPLPLEKLSRQLNTKCTTDPLEQKRMQVVLLLPGSFNPPTYMHLRMFE
D5A8W4__________________SDCCGTAAANSGSMDVPLPLEKISCQLNRKCATDPLEQKRTQVVLLLPGSFNPPTYMHLRMFD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain