SustainPineDB

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Assembly info
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Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene24216

Length: 226 nt

UniGene Fasta

>biog3_v1.0_unigene24216
AACAATATGCTACAAGAGGACTGCACTCGTCAAAGCAAAGCATGGAACACAGATGGGTCATTCCCTTTGCTATTAGTTCCATGGTTTTTCTCCTCCTCCTGTTCATACATTAAAGTCCATTGTTGACATATCTTCTCCAGTATACTCGGTGATATCACCGTTGGGCATAGGCCCAGATCAAGCAGCACAGCATAANGTTTTTGTGGAATCTAAAGCAGTGGGCTTT

Ace file of the UniGene biog3_v1.0_unigene24216

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3249	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	Acetylglucosaminyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RUK1_RICCO	-	-	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	100%
Blast2go	glycosyltransferase family 14 protein	-	-	74%

Source	GOs	Term	Type	Identity
Blast2go	carbohydrate biosynthetic process	GO:0016051	Biological Process	74%
Blast2go	acetylglucosaminyltransferase activity	GO:0008375	Molecular Function	74%
Blast2go	membrane	GO:0016020	Cellular Component	74%

Source	InterPros	Term	Type	Identity
Sma3	Inositol monophosphatase	IPR000760	-	-
Sma3	Glycosyl transferase, family 14	IPR003406	-	-
Sma3	Protein of unknown function DUF674	IPR007750	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9P0C4

Fln msg: Separated hits, possible frame ERROR between 89 and 107, Distance to subject end: 207 aas, your sequence is shorter than subject: 62 - 269

Fln protein: MEHRWVIPFAISSMVxxxxxxxTLKSIVDISSPVYSVISPLGIGPDQAAQHKVFVESKAVGF

Protein Length: 63

Fln nts: AACAATATGCTACAAGAGGACTGCACTCGTCAAAGCAAAGC_-_ATGGAACACAGATGGGTCATTCCCTTTGCTATTAGTTCCATGGTTTTxxxxxxxxxxxxxxxxxxTACATTAAAGTCCATTGTTGACATATCTTCTCCAGTATACTCGGTGATATCACCGTTGGGCATAGGCCCAGATCAAGCAGCACAGCATAAaGTTTTTGTGGAATCTAAAGCAGTGGGCTTT

Fln Alignment:

biogeco3_mira_c23776___MEHRWVIPFAISSMVFxxxxxxTLKSIVDISSPVYSVISPLGIGPDQAAQHKVFVESKAVG
A9P0C4__________________MEHRWVIPFAISSMVFxxxxxxTTTSIVDISSPVYSVIAPLGLGLDQAAQHNAFVEPKALG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain