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UniGene Name: biog3_v1.0_unigene23918
Length: 133 nt
 UniGene Fasta
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| >biog3_v1.0_unigene23918
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Ace file of the UniGene biog3_v1.0_unigene23918
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Parent Assembly | Parent UniGene | Reads (related/total) |
|---|---|---|
| SustainPine v2.0 | sp_v2.0_unigene7458 | 2/2 |
| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | beta-amylase 7 [Arabidopsis thaliana] sp|O80831.2|BAM7_ARATH RecName: Full=Beta-amylase 7; AltName: Full=1,4-alpha-D-glucan maltohydrolase; AltName: Full=Beta-amylase 4 gb|AEC10613.1| beta-amylase 7 [Arabidopsis thaliana] | - | - | 0.0 | 57% |
| Blast2go | beta-amylase 8-like | - | - | 0.0 | 77% |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Beta-amylase. | EC:3.2.1.2 | - | 0.0 | 77% |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Starch and sucrose metabolism | 00500 | 0.0 | 77% | |
| Blast2go | Metabolic pathways | 01100 | 0.0 | 77% | |
| Blast2go | Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases. | EC:2.7.11.- | - | 0.0 | 77% |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | protein phosphorylation | GO:0006468 | Biological Process | 0.0 | 77% |
| Blast2go | regulation of meristem growth | GO:0010075 | Biological Process | 0.0 | 77% |
| Blast2go | gametophyte development | GO:0048229 | Biological Process | 0.0 | 77% |
| Blast2go | transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | Biological Process | 0.0 | 77% |
| Blast2go | regulation of meristem structural organization | GO:0009934 | Biological Process | 0.0 | 77% |
| Blast2go | microsporocyte differentiation | GO:0010480 | Biological Process | 0.0 | 77% |
| Blast2go | polysaccharide catabolic process | GO:0000272 | Biological Process | 0.0 | 77% |
| Blast2go | cation binding | GO:0043169 | Molecular Function | 0.0 | 77% |
| Blast2go | beta-amylase activity | GO:0016161 | Molecular Function | 0.0 | 77% |
| Blast2go | protein serine/threonine kinase activity | GO:0004674 | Molecular Function | 0.0 | 77% |
| Blast2go | receptor serine/threonine kinase binding | GO:0033612 | Molecular Function | 0.0 | 77% |
| Blast2go | ATP binding | GO:0005524 | Molecular Function | 0.0 | 77% |
| Blast2go | chloroplast | GO:0009507 | Cellular Component | 0.0 | 77% |
| Blast2go | plasma membrane | GO:0005886 | Cellular Component | 0.0 | 77% |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Glycoside hydrolase, family 14B, plant | IPR001371 | - | 0.0 | - |
| Sma3 | Glycoside hydrolase, family 14 | IPR001554 | - | 0.0 | - |
| Sma3 | BZR1, transcriptional repressor | IPR008540 | - | 0.0 | - |
| Sma3 | Glycoside hydrolase, subgroup, catalytic domain | IPR013781 | - | 0.0 | - |
| Sma3 | Glycoside hydrolase, family 14, conserved site | IPR018238 | - | 0.0 | - |
| Full-Lengther Next Prediction |
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Fln status: unknown
Fln database: testcode
Fln msg: Sequence length < 200 nt
Test code: 0
Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
