SustainPineDB

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Assembly info
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Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene23154

Length: 449 nt

UniGene Fasta

>biog3_v1.0_unigene23154
AATGTCAAAGAGCAGATGGTGGGGCTGGTTGATCCTACACTGAACAAAGTAGACGATGCTGAACTCTGTTCAGTCTGTGAGGTTGCACGCCTATGCATTCAGAGAGATTCATCAAGCCGACCTGTCATGAGGGATGTGGTGGAAATGCTGACAAAAGACCTAAAGATTGCCACAGAAGCAGCCGCACCTGCCAATAGTCCTGTCACACTGAGGGGTCTGCTGGAAATATTGTAGTATATGTTTTGTTCCATCTTTGATCTTGGTGCGCACATAGGCAAGCATGGTTGTATGAGGAGCTTATTCTAGGTTGTGTTGATTTTGTACTTGTGCGTTTAACAGTAAATGTCTACTGAATTTGGGATTGTCTTCCTCATCTGTTTTTGTTTTGTTTGTTTTTTCACATTACCCCTCTTTGAAGAACCATAAACACACACCACTGCAAAGACATT

Ace file of the UniGene biog3_v1.0_unigene23154

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene33211	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Receptor protein kinase, putative n=1 Tax=Ricinus communis RepID=B9T7R3_RICCO	-	-	2.0e-24	40%
FL-Next	sp=Probable LRR receptor-like serine/threonine-protein kinase At5g45840; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	41%
Blast2go	leucine-rich repeat protein kinase-like protein	-	-	0.0	59%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: C0LGU7

Fln msg: your sequence is shorter than subject: 78 - 695

Fln protein: NVKEQMVGLVDPTLNKVDDAELCSVCEVARLCIQRDSSSRPVMRDVVEMLTKDLKIATEAAAPANSPVTLRGLLEIL*

Protein Length: 79

Fln nts: AATGTCAAAGAGCAGATGGTGGGGCTGGTTGATCCTACACTGAACAAAGTAGACGATGCTGAACTCTGTTCAGTCTGTGAGGTTGCACGCCTATGCATTCAGAGAGATTCATCAAGCCGACCTGTCATGAGGGATGTGGTGGAAATGCTGACAAAAGACCTAAAGATTGCCACAGAAGCAGCCGCACCTGCCAATAGTCCTGTCACACTGAGGGGTCTGCTGGAAATATTGTAG___TATATGTTTTGTTCCATCTTTGATCTTGGTGCGCACATAGGCAAGCATGGTTGTATGAGGAGCTTATTCTAGGTTGTGTTGATTTTGTACTTGTGCGTTTAACAGTAAATGTCTACTGAATTTGGGATTGTCTTCCTCATCTGTTTTTGTTTTGTTTGTTTTTTCACATTACCCCTCTTTGAAGAACCATAAACACACACCACTGCAAAGACATT

Fln Alignment:

biogeco3_mira_c22195___LVDPTLNKVDDAELCSVCEVARLCIQRDSSSRPVMRDVVEMLTKDLKIATEAAAPANSPV
C0LGU7__________________MIDPTLTTYKEEELEAICDVARHCLKLDESQRPKMKYVVQQLKEVINISQEQATPRLSPL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain