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UniGene Name: biog3_v1.0_unigene22560
Length: 159 nt
 UniGene Fasta
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| >biog3_v1.0_unigene22560
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Ace file of the UniGene biog3_v1.0_unigene22560
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If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
| Annotations |
|---|
| Parent Assembly | Parent UniGene | Reads (related/total) |
|---|---|---|
| SustainPine v2.0 | sp_v2.0_unigene9858 | 2/2 |
| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | prephenate dehydratase [Ipomoea trifida] dbj|BAF37790.1| hypothetical protein [Ipomoea trifida] | - | - | 0.0 | 66% |
| Blast2go | protein | - | - | 0.0 | 86% |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Arogenate dehydratase. | EC:4.2.1.91 | - | 0.0 | 86% |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Phenylalanine, tyrosine and tryptophan biosynthesis | 00400 | 0.0 | 86% | |
| Blast2go | Biosynthesis of phenylpropanoids | 01061 | 0.0 | 86% | |
| Blast2go | Biosynthesis of alkaloids derived from shikimate pathway | 01063 | 0.0 | 86% | |
| Blast2go | Biosynthesis of plant hormones | 01070 | 0.0 | 86% | |
| Blast2go | Metabolic pathways | 01100 | 0.0 | 86% | |
| Blast2go | Biosynthesis of secondary metabolites | 01110 | 0.0 | 86% | |
| Blast2go | Transferases, Transferring one-carbon groups, Methyltransferases. | EC:2.1.1.- | - | 0.0 | 86% |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Phenylalanine, tyrosine and tryptophan biosynthesis | 00400 | 0.0 | 86% | |
| Blast2go | Biosynthesis of phenylpropanoids | 01061 | 0.0 | 86% | |
| Blast2go | Biosynthesis of alkaloids derived from shikimate pathway | 01063 | 0.0 | 86% | |
| Blast2go | Metabolic pathways | 01100 | 0.0 | 86% | |
| Blast2go | Biosynthesis of secondary metabolites | 01110 | 0.0 | 86% |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | methylation | GO:0032259 | Biological Process | 0.0 | 86% |
| Blast2go | L-phenylalanine biosynthetic process | GO:0009094 | Biological Process | 0.0 | 86% |
| Blast2go | arogenate dehydratase activity | GO:0047769 | Molecular Function | 0.0 | 86% |
| Blast2go | RNA binding | GO:0003723 | Molecular Function | 0.0 | 86% |
| Blast2go | amino acid binding | GO:0016597 | Molecular Function | 0.0 | 86% |
| Blast2go | methyltransferase activity | GO:0008168 | Molecular Function | 0.0 | 86% |
| Blast2go | prephenate dehydratase activity | GO:0004664 | Molecular Function | 0.0 | 86% |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Amino acid-binding ACT | IPR002912 | - | 0.0 | - |
| Sma3 | Prephenate dehydratase | IPR001086 | - | 0.0 | - |
| Sma3 | Prephenate dehydratase, conserved site | IPR018528 | - | 0.0 | - |
| Full-Lengther Next Prediction |
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Fln status: unknown
Fln database: testcode
Fln msg: Sequence length < 200 nt
Test code: 0
Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
