SustainPineDB

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Assembly info
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Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene22459

Length: 234 nt

UniGene Fasta

>biog3_v1.0_unigene22459
AATGTAAACCAAATCTCAGGTTCGATACCTGCGAATCTGGGCAGTTTGTCAGTGCTTAATTATTTAGACCTTTCGGACAATCTTCTCACGGGCTCGATTCCTTCCGAGCTCGGGAATCTGAAGTTGAATACCTTCAATGTCTCGAACAACCGTTTGTCCGGTACAGTTCCTTTGGCCTTTGAGAGTCCGGTCTATGAAAAAGGTTTTTTGGGAAATCCTGAGTTGTGTAACATT

Ace file of the UniGene biog3_v1.0_unigene22459

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene156	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL	-	-	0.0	78%
FL-Next	tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca).	-	-	0.0	39%

Source	InterPros	Term	Type	Identity
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3		IPR017442	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q19AV8

Fln msg: Distance to subject end: 368 aas, your sequence is shorter than subject: 78 - 998

Fln protein: NVNQISGSIPANLGSLSVLNYLDLSDNLLTGSIPSELGNLKLNTFNVSNNRLSGTVPLAFESPVYEKGFLGNPELCNI

Protein Length: 79

Fln nts: AATGTAAACCAAATCTCAGGTTCGATACCTGCGAATCTGGGCAGTTTGTCAGTGCTTAATTATTTAGACCTTTCGGACAATCTTCTCACGGGCTCGATTCCTTCCGAGCTCGGGAATCTGAAGTTGAATACCTTCAATGTCTCGAACAACCGTTTGTCCGGTACAGTTCCTTTGGCCTTTGAGAGTCCGGTCTATGAAAAAGGTTTTTTGGGAAATCCTGAGTTGTGTAACATT

Fln Alignment:

biogeco3_mira_c21173___NVNQISGSIPANLGSLSVLNYLDLSDNLLTGSIPSELGNLK-LNTFNVSNNRLSGTVPLAFES
Q19AV8__________________SINRLSGSIPESITKLDKVAQIELYQNLLSGPIPVAMGELKALKRFDASMNMLNGSIPAGLGS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain