SustainPineDB

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Assembly info
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Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene21748

Length: 285 nt

UniGene Fasta

>biog3_v1.0_unigene21748
TGCAAATATGACCATTGCCAAATTCACTGGACTTGCTGAATTGATACCTGAACAAGCCCATCCAGTTGATGATGGTATATATAGAGCTATTGATATTTACTTAAAGGCCCATCCATCTTTAAATGATTTAGAACGCAAAAAGGTATGTAGTGTGATGGATTGCAAAAAGCTCTCTTCAGAAGCATGTGCACACGCTGCTCAGAATGAGCGTCTTCCAGTTCATATTGTTGTTCAGGTACTGTACTTTGAACAGCAACGCCTTCGAAATGCAATATCTATAACTTT

Ace file of the UniGene biog3_v1.0_unigene21748

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene36840	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Root phototropism protein, putative n=1 Tax=Ricinus communis RepID=B9T4I9_RICCO	-	-	4.0e-35	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	63%
Blast2go	btb poz domain-containing protein at5g67385-like	-	-	2.31396e-41	75%

Source	InterPros	Term	Type	Identity
Sma3	BTB/POZ-like	IPR000210	-	-
Sma3	NPH3	IPR004249	-	-
Sma3	TonB box, conserved site	IPR010916	-	-
Sma3	BTB/POZ fold	IPR011333	-	-
Sma3	BTB/POZ	IPR013069	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LPD8

Fln msg: Distance to subject end: 135 aas, your sequence is shorter than subject: 94 - 648

Fln protein: ANMTIAKFTGLAELIPEQAHPVDDGIYRAIDIYLKAHPSLNDLERKKVCSVMDCKKLSSEACAHAAQNERLPVHIVVQVLYFEQQRLRNAISIT

Protein Length: 95

Fln nts: TGCAAATATGACCATTGCCAAATTCACTGGACTTGCTGAATTGATACCTGAACAAGCCCATCCAGTTGATGATGGTATATATAGAGCTATTGATATTTACTTAAAGGCCCATCCATCTTTAAATGATTTAGAACGCAAAAAGGTATGTAGTGTGATGGATTGCAAAAAGCTCTCTTCAGAAGCATGTGCACACGCTGCTCAGAATGAGCGTCTTCCAGTTCATATTGTTGTTCAGGTACTGTACTTTGAACAGCAACGCCTTCGAAATGCAATATCTATAACTTT

Fln Alignment:

biogeco3_mira_c20139___NMTIAKFTGLAELIPEQAHPVDDGIYRAIDIYLKAHPSLNDLERKKVCSVMDCKKLSSEACAHAAQNERLPVHIVVQVLYFEQQRLRNAIS
B8LPD8__________________NLKPAKFHSLADALPDYARLFDDGLYRAIDIYLKAHPWVTEEEREKICSIMDCQKLTLEACTHAAQNERLPLRVVVQVLFFEQLQLRNAIA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain